Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13605g00002 ATGCTAGAAGCAACATCTGAATTTTCAAAAGCCATTGTACGGAGAGAGAAGGTGACAGATGAAGAGGTAGTGCATGAGAATGAGAATCGGACTAAGCGAAGAAGGAAGAAAATATTGTCGTTGTTGGTACGGCACATGAGTGAGAGATCAAATATGGAGAATATGCCACCAGGTTATCGTTTCTACCCAACGGAAGAGGAACTCATTTCATTCTATCTTCACAATAAACTCCAAGGAGAGAGGGAGGACATTAATCGAGTTATACCAGTCGTTGATATATACGATTATAACCCATCCCAACTCCCACAAATTTCAGGAGAAGCGAGTCTGAGGGACACGGAACAATGGTTCTTTTTCATTCCGAGGCAAGAGACTGAAGCTCGAGGAGGGAGACCAAAGCGTCTCACAACTACCGGCTACTGGAAGGCTACCGGCTCTCCTAATCATGTTTATTCTTCCGATAATCGCATCATCGGCATTAAGAGGACTATGGTTTTTTATAGTGGAAGAGCTCCAAATGGAACCAAAACCGATTGGAAGATGAATGAGTATACGGCCATCAAGCCTCAACCATCCTCTTCAAATAAGACAGTTCCTACGTTAAGGAAGGAATTCAGTTTATGCCGAGTGTACAGAAAATCAAAGTGCTTGCGGGCATTTGATAGACGACCACCGCCAAGGAGGGATTATGGGGCTGAAGAGCAAGAAAAGGGCTCAACATCTTACGATAATCATCAAATGGTGGAGAGAAGTGCAACAAATTCATCAGAGAGTTCATCCTCCGGAGACCATGACCAACGCCCACACGGTGAGGAACCTACCCAAATGCTTGTTGACAACGACGACGCTTATTTGGATTGGGAGAAAGTGGATTTGTTCTTGGGATCGGAACCATGA 897 0.4448 MLEATSEFSKAIVRREKVTDEEVVHENENRTKRRRKKILSLLVRHMSERSNMENMPPGYRFYPTEEELISFYLHNKLQGEREDINRVIPVVDIYDYNPSQLPQISGEASLRDTEQWFFFIPRQETEARGGRPKRLTTTGYWKATGSPNHVYSSDNRIIGIKRTMVFYSGRAPNGTKTDWKMNEYTAIKPQPSSSNKTVPTLRKEFSLCRVYRKSKCLRAFDRRPPPRRDYGAEEQEKGSTSYDNHQMVERSATNSSESSSSGDHDQRPHGEEPTQMLVDNDDAYLDWEKVDLFLGSEP 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13605g00002 298 ProSiteProfiles NAC domain profile. 55 213 IPR003441 GO:0003677|GO:0006355
Mupr13605g00002 298 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 53 260 - -
Mupr13605g00002 298 Gene3D NAC domain 64 217 IPR036093 GO:0003677|GO:0006355
Mupr13605g00002 298 MobiDBLite consensus disorder prediction 262 281 - -
Mupr13605g00002 298 MobiDBLite consensus disorder prediction 221 281 - -
Mupr13605g00002 298 Pfam No apical meristem (NAM) protein 56 185 IPR003441 GO:0003677|GO:0006355
Mupr13605g00002 298 MobiDBLite consensus disorder prediction 221 240 - -
Mupr13605g00002 298 MobiDBLite consensus disorder prediction 241 261 - -
Mupr13605g00002 298 SUPERFAMILY NAC domain 42 213 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13605g00002 Mupr-Chr13605 29700 31349 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13605g00002 58 224 NAC Transcription Factor Family AT5G22380 61.310 6.33e-74 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr13605g00002 NAM 7.4e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13605g00002 - - gmx:100777948 414.075