Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13602g00001 ATGGAGCTTGGTTTGAGCTTAGGAGACTCTTCAAGGCCTTTGCTTGGCTTCATGGAAAAACCTCGTGAAGCTTCCAACCAACTGGGGTTAGGCTTCAACACCACGTTATCAATTGGTCCAATCATCACTAGACAAAAAGATCAACAGCATGAACAAGAAGAATACGAAGAAGAAGAAACAAAGCCAAAGAGCAACAACAACAACATCAACACTCGCAGAACACGAGATCCTAACGACCTTTCTTCCAAACCCAACAACAACAACAACCCAGTTCTGCATCAACTTGATCTTCTCCCTCAACTCTCTTTCCCATGGCACCCTCCTTCTGAAAACGGGAGTTTTTCATCTGAGTTGGGGGGTTCTTCCCGGGGCCTAGACGTAAACGCGCAGCCGCCGCCGGCGGAGGACGAGGCGGAGGAAGCGGCGGCGCTGTCGTCATCTCCGAACAGCGCAGCCTCATCGTTTCAAATGGATCTCTGCATATACAACAACAGAGGAGGGAGCTTCTACAAGAGGGACTCTGAGGGTGAGGCTTATGATCAAAGGGCCTCTTCAAGAGCGAGCGATGAAGATGAAAACAACGGTGGTGACGCCAGCAACACCAGAAAGAAACTTAGACTCTCAAAGGAACAGTCTGCGTTCCTTGAAGAGAGCTTCAAAGAGCACAACACACTTAACCCCAAACAGAAGCTTGCGCTTGCTAAACAACTCAATCTTCGACCTCGCCAAGTAGAAGTGTGGTTCCAAAACCGAAGAGCAAGGACAAAGTTGAAGCAAACGGAAGTGGATTGCGAGTACTTGAAGAGGTGTTGTGAGACACTAACAGAAGAGAATAGGAGGCTTCACAAGGAGCTTCAAGAATTGAGGGCTTTGAAGACTTCAAATCCATTCTACATGCAATTACCAGCCACAACTTTGACCATGTGCCCTTCTTGTGAGCGCGTGGCCACAAATTCCACATCCACTTCCTCCTCTCCTAGTGCCACCATCAATGCTAATACAGGAGCCATCAAAACGAGTAATAATAATAATGACTCGCCCTCCAAAGCCATTGGATTCCCCTTTGGAAAACCCAGGTTTCATCCATTTGTTCACACTAGCCAACAACCCCATCAACATCAATCCCCAGCATCTTGA 1137 0.4776 MELGLSLGDSSRPLLGFMEKPREASNQLGLGFNTTLSIGPIITRQKDQQHEQEEYEEEETKPKSNNNNINTRRTRDPNDLSSKPNNNNNPVLHQLDLLPQLSFPWHPPSENGSFSSELGGSSRGLDVNAQPPPAEDEAEEAAALSSSPNSAASSFQMDLCIYNNRGGSFYKRDSEGEAYDQRASSRASDEDENNGGDASNTRKKLRLSKEQSAFLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELQELRALKTSNPFYMQLPATTLTMCPSCERVATNSTSTSSSPSATINANTGAIKTSNNNNDSPSKAIGFPFGKPRFHPFVHTSQQPHQHQSPAS 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13602g00001 378 Coils Coil 271 294 - -
Mupr13602g00001 378 MobiDBLite consensus disorder prediction 39 150 - -
Mupr13602g00001 378 MobiDBLite consensus disorder prediction 106 123 - -
Mupr13602g00001 378 ProSiteProfiles 'Homeobox' domain profile. 198 258 IPR001356 GO:0003677
Mupr13602g00001 378 Gene3D - 206 256 - -
Mupr13602g00001 378 MobiDBLite consensus disorder prediction 317 349 - -
Mupr13602g00001 378 MobiDBLite consensus disorder prediction 46 63 - -
Mupr13602g00001 378 MobiDBLite consensus disorder prediction 171 205 - -
Mupr13602g00001 378 SUPERFAMILY Homeodomain-like 189 259 IPR009057 -
Mupr13602g00001 378 FunFam Homeobox-leucine zipper protein 18 184 263 - -
Mupr13602g00001 378 MobiDBLite consensus disorder prediction 317 378 - -
Mupr13602g00001 378 Pfam Homeodomain 202 256 IPR001356 GO:0003677
Mupr13602g00001 378 SMART halz 258 301 IPR003106 GO:0006355|GO:0043565
Mupr13602g00001 378 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 59 333 - -
Mupr13602g00001 378 MobiDBLite consensus disorder prediction 64 95 - -
Mupr13602g00001 378 CDD homeodomain 202 259 IPR001356 GO:0003677
Mupr13602g00001 378 ProSitePatterns 'Homeobox' domain signature. 233 256 IPR017970 GO:0000981|GO:0006355
Mupr13602g00001 378 SMART HOX_1 200 262 IPR001356 GO:0003677
Mupr13602g00001 378 Pfam Homeobox associated leucine zipper 258 292 IPR003106 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13602g00001 Mupr-Chr13602 17903 19655 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13602g00001 116 317 Homeobox Transcription Factor Family AT2G44910 60.870 4.24e-69 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mupr13602g00001 Homeodomain 2.8e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13602g00001 K09338 - gmx:100778742 546.584