Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1358g00003 ATGGTGGGTATGAGAGCTTGCACCTTTGTCTTTTTCTCCCTGATGATCACAATGAGTTGTTATGGTGACACAAACCCAAATGATCTCAAAATTCTGAATGATTTCAGAAAAGGGTTGAAGAATCCAGAGCTTCTCAAGTGGCCAGACAGTGGAAATGACCCTTGTGGTCCTCCCTCATGGCCCTTTGTGTTCTGCTCTGGAGGTAGAGTCACTCAGATTCAGACCAAGAATCTAGGTCTTGAAGGATCATTGCCTCCAAACTTTAACCAACTCTCAGAGCTTCAAAATTTGGGTCTTCAGCGCAACAACCTTAGTGGAGCGCTGCCCACTTTCAGTGGATTGTCCAAATTGCAATTTGCCTTTTTGGATTACAATGATTTTGATGCAATCCCATCTGATTTCTTCAATGGACTCACCAGCATCAGGGTCTTGTCTTTGGAGGAAAATCCTTTGAATGCTACCACTGGTTGGTCATTTCCTAAGGACTTGGAAAATTCAGTGCAATTGACCAATCTTTCTCTGGTGCATTGTAATTTGGTTGGAGCATTGCCTGATTTTCTGGGCAAATTGCCTTCTCTCACAAATCTGAGGCTTTCAGACAACAGACTGTCTGGTGGCATTCCAGCTAGTTTTGGTCAGTCTTCAATCCAGGTTTTGTGGTTGAATGATCAAGAAGGAGGTGGCATGACAGGTCCTATTGATGTCATTGCTTCAATGACTTTCCTGACACAGGTTTGGCTTCATGGAAACCAGTTCACTGGGACAATTCCACAGAACATTGGAAATCTAACTTCCTTGCAGGAACTCAACCTCAATAGCAACCAACTTGTTGGCTTGATTCCGAATTCCTTGGCAAATTTGGACCTTCAGATACTGGTGTTAAACAATAACATGTTCATGGGTCCAATACCAAAGTTCAATGCTGCCAAAGTGTCTTATGATTCCAATCTCTTTTGTCAACCTAAGCCTGGGCTTCAATGTGCCCCTGAAGTCACTGCTCTGCTGGATTTTCTCCAAAATCTGAATTACCCTTCATCTCTTGCTTCTAAATGGTCAGGTAATGATCCGTGTGGAGAGCCATGGTTCGGATTGAACTGCGATCGCAATTCAAAGGTATCTATGATCAATTTGCCAAAGCAAAAGCTGAATGGTACACTGAGTCCCTCCCTTGCTAAGTTAGATTCACTCCTTGAAATTAGGCTTGCAGGAAATAATATTACCGGCAATGTTCCGAGTAACTTTACTGAATTGAAATCTTTGAGTTTGTTGGATTTAAGTGATAACAATGTTGAGCCACCACTGCCAAACTTTCATGCTGGTGTGAAGGTTATTATTGAGGGTAACCCTCTTTTTGTTAATCAACCTGTAATTAGTCCCAGTCCCATGCCTATTACAAACCCACCACCTTCAAGTGCAGAGCCTTCACCTCACAACTCGTCACCGCCACCATCACCTATGCAACCTTCCCCAAGTCAGAGTCCAAGCTCGAATTCGAATCAGTCTAGGTCTTTTGAGTTAAAGGCCCACCAAAATGTCTTCAAAAGATTCAAAACACTAACAATAGTAGCTGGAGCTGTAATCCTTACATTTGTAGCTCTTTTGGTTACTTCTATCTTCATATGTTGTTTGAAGAAAAAAGCCTCCTTGGATGCTCCTAGCACTGTTGTGGTTCACACTAAAGATCCATCTTATCCAGAAAAGATGATTAAATTTGCAGTGTCGGATAGCACCATCGGAAGCTTATCGTCAAAGACAGGGATAAGTTCTCTGACTAACAATAGTGGTGAAACTGAGAGTTCTCATGTAATTGAGGCTGGCAACATTGCCATCTCTATTCAAATTCTACGCAAGGTCACCAACAATTTTGCTCCAGAAAACGAGCTAGGCCATGGTGGGTTTGGAACTGTTTACAAGGGTGAACTAGAACATGGGACAAAAATAGCAGTGAAGAGAATGGAATGTGGACCTGTTAGCAGCAGAGCACTGGAGGAGTTTCAAGCTGAAATAGCTGTTCTTTCCAAAGTCCGGCACCGGAATTTGGTGTCCCTGCTAGGCTATTCCATCGAAGGAAATGAAAGACTTTTGGTTTATGAATATATGCCTATGGGTGCTCTAAGCAGGCATCTTTTTCATTGGAAAAGCTTGAACTTGGAGCCTTTGTCTTTGTCACACAGGCTTACAATAGCACTTGATGTTGCTAGAGCGATGGAATACCTTCATGGTCTTGCACGCCAAACCTTCATCCATCGAGACCTCAAGTCTTCTAATATTCTACTGGGGGATGATTTTCGTGCAAAAGTTTCTGATTTTGGTCTGGTGAAACTTGCCCCGGATGGCGAGAAGTCTGTGGCAACAAAGCTTGCTGGAACATTTGGATACCTTGCCCCTGAATATGCAGTGATGGGGAAAATCACCACTAGAGTTGATGTGTTCAGCTACGGTGTGGTATTGATGGAACTTCTGACAGGACTAATGGCACTTGACGAGAACCGGCCAGAGGAAAGCCGGTACTTAGCCGAATGGTTTTGGCAAATTAAATCGAGCAAAGAAACACTTATGGCTGCCATTGATCCAGCTCTTGAAGCGAATGAAGAGACTTTTGAGAGCATTTCCATTGTGGCTGAGCTTGCTGGACATTGCACTGCCAGGGAAGCAAGTCACAGGCCCGATATGAGCCACGCAGTCAATGTGCTATCCGCATTAGTGGAGAAATGGCGACCAGTTGATGAAGAGTTTGATTACAGCTCAGGCATTGAATTCAATCAACCACTTCCCCAGTTGTTGAAAGTTTGGAAGGAAGCAGAAGGCAAAGAATCAAGCTATGCAAGTGAACACAGTGAAGGAAGCATACCAGCTAGGCCTACTGGTTTTGCAGACTCTTTTACTTCAGCTGATGCAAGATGA 2904 0.4353 MVGMRACTFVFFSLMITMSCYGDTNPNDLKILNDFRKGLKNPELLKWPDSGNDPCGPPSWPFVFCSGGRVTQIQTKNLGLEGSLPPNFNQLSELQNLGLQRNNLSGALPTFSGLSKLQFAFLDYNDFDAIPSDFFNGLTSIRVLSLEENPLNATTGWSFPKDLENSVQLTNLSLVHCNLVGALPDFLGKLPSLTNLRLSDNRLSGGIPASFGQSSIQVLWLNDQEGGGMTGPIDVIASMTFLTQVWLHGNQFTGTIPQNIGNLTSLQELNLNSNQLVGLIPNSLANLDLQILVLNNNMFMGPIPKFNAAKVSYDSNLFCQPKPGLQCAPEVTALLDFLQNLNYPSSLASKWSGNDPCGEPWFGLNCDRNSKVSMINLPKQKLNGTLSPSLAKLDSLLEIRLAGNNITGNVPSNFTELKSLSLLDLSDNNVEPPLPNFHAGVKVIIEGNPLFVNQPVISPSPMPITNPPPSSAEPSPHNSSPPPSPMQPSPSQSPSSNSNQSRSFELKAHQNVFKRFKTLTIVAGAVILTFVALLVTSIFICCLKKKASLDAPSTVVVHTKDPSYPEKMIKFAVSDSTIGSLSSKTGISSLTNNSGETESSHVIEAGNIAISIQILRKVTNNFAPENELGHGGFGTVYKGELEHGTKIAVKRMECGPVSSRALEEFQAEIAVLSKVRHRNLVSLLGYSIEGNERLLVYEYMPMGALSRHLFHWKSLNLEPLSLSHRLTIALDVARAMEYLHGLARQTFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPDGEKSVATKLAGTFGYLAPEYAVMGKITTRVDVFSYGVVLMELLTGLMALDENRPEESRYLAEWFWQIKSSKETLMAAIDPALEANEETFESISIVAELAGHCTAREASHRPDMSHAVNVLSALVEKWRPVDEEFDYSSGIEFNQPLPQLLKVWKEAEGKESSYASEHSEGSIPARPTGFADSFTSADAR 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1358g00003 967 SMART LRR_typ_2 114 137 IPR003591 -
Mupr1358g00003 967 SMART LRR_typ_2 91 113 IPR003591 -
Mupr1358g00003 967 SMART LRR_typ_2 263 286 IPR003591 -
Mupr1358g00003 967 SMART LRR_typ_2 138 161 IPR003591 -
Mupr1358g00003 967 SMART LRR_typ_2 190 214 IPR003591 -
Mupr1358g00003 967 SUPERFAMILY Protein kinase-like (PK-like) 596 898 IPR011009 -
Mupr1358g00003 967 ProSitePatterns Protein kinases ATP-binding region signature. 628 650 IPR017441 GO:0005524
Mupr1358g00003 967 ProSitePatterns Serine/Threonine protein kinases active-site signature. 747 759 IPR008271 GO:0004672|GO:0006468
Mupr1358g00003 967 Gene3D Ribonuclease Inhibitor 329 454 IPR032675 -
Mupr1358g00003 967 MobiDBLite consensus disorder prediction 456 503 - -
Mupr1358g00003 967 FunFam receptor protein kinase TMK1 700 917 - -
Mupr1358g00003 967 FunFam Leucine-rich repeat receptor-like kinase 329 454 - -
Mupr1358g00003 967 PANTHER OSJNBA0070M12.3 PROTEIN 7 967 - -
Mupr1358g00003 967 FunFam receptor protein kinase TMK1 584 699 - -
Mupr1358g00003 967 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Mupr1358g00003 967 Gene3D Ribonuclease Inhibitor 26 324 IPR032675 -
Mupr1358g00003 967 MobiDBLite consensus disorder prediction 938 967 - -
Mupr1358g00003 967 SUPERFAMILY L domain-like 31 449 - -
Mupr1358g00003 967 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Mupr1358g00003 967 Pfam Leucine rich repeat N-terminal domain 329 367 IPR013210 -
Mupr1358g00003 967 Gene3D Transferase(Phosphotransferase) domain 1 700 916 - -
Mupr1358g00003 967 Gene3D Phosphorylase Kinase; domain 1 583 699 - -
Mupr1358g00003 967 Pfam Protein tyrosine and serine/threonine kinase 625 897 IPR001245 GO:0004672|GO:0006468
Mupr1358g00003 967 FunFam Receptor-like kinase TMK4 26 324 - -
Mupr1358g00003 967 CDD STKc_IRAK 628 898 - -
Mupr1358g00003 967 SMART serkin_6 622 901 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1358g00003 967 ProSiteProfiles Protein kinase domain profile. 622 902 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1358g00003 967 MobiDBLite consensus disorder prediction 460 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1358g00003 Mupr-Chr1358 14644 18117 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1358g00003 80 911 Receptor kinase-like Gene Family AT1G55610 29.910 1.08e-74 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Mupr1358g00003 PK_Tyr_Ser-Thr 1.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1358g00003 K00924 - gmx:100815045 1590.09