Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mupr13583g00001 | ATGCAACTAAGAAACGAAAAGAAGAAGAAGAACGAGTCAAACACAATGGAAAACCAATCCTCAACCTCATCAACGATGCAGTTCCTCCTCCTCGAGCAGGTTCAGTTCCTGAAGGTGAACGACGATTCTCTGCTGCAGTGGGAGCTCGTCAACGTTGTTGACGCCGAAGAGGAAATCGAGGGGTTCGGTTCTTGGGACTCTTCCGTTTCTTGGTCTGAATCCGATTTTAATTCTTCTCCCAACGATGCGCCAATTGAAGAGATTCGCCATCTAATTCTTCGTCCCGATGCGGGTTTACAAGATCGTCATGATGATGTTGGTGACGTTGATGACGAATCGGGTTTAAAAAATCACCACTACCATTATCAACACCATCACCGTGATGATGTTGATGATGATGAGGATAACTATGATGATGATGATAACGATGATGATGGGTTTGGGTATGGTTTGGATGATGAGCTTGTTCCGTGGAGCGTGAGCGGCAAGTTCGAGAGGCAGAGGATGAGGAAATTGGGGAAAAGGGCATTTTCGAAAATGCACAATTCTAAGAAATCTCCTTATCTGTTTGTGAGGCCTGGGTGCGTCCGTCCTTCATCCCCGGACGACTCCCTTTCCAGCCCTATAGGCAACACGTTCTCTTCGCCGGCCGGTAGACGCCGCCGCCTCTCTTCCACCCCCTCCGCATTCGCCACCCCGCCGGAGCGCCGCTCCCGATTCGCCTCCTCCGATGCCACCCCAACTCCGTCACGCTCCCGCCAGAGAGGCGCCGGCACCGGGCGCGTTCCCGCCACGCCGACCTCCACTACCGACGACGTGCCGGCCTCGTCGGACGGCGGCGACGGGTACGACATGGACGACGCCAGGCCCACCTTCGTGTGGGGCACCAACATAAGCGTGGAAGATGTGAATGATGCGATTCAGAGATTTCTGAGGGACTTCAGAGAAGTGTCTTCGTCGCAGGGTGACGATGACGAGTTGCATTTACACACCGAAGGGAAGTATGAGAAATTGATCAGACTGGTTGTTGAAATCGAAGGAGATTCTCTGGACGTTGATGCGCACGACGTGTTTGATCATGACCCCGATTTGTACACCAAGATGGTTAGGTACCCCCTCGAGGTGCTCGCGCTTTTTGACTTGGTTTTGATGAACACAGTTAGCCGATTGAAACCTATGTTCGAGAAGCACGTTCAGACGCGAATTTTCAATCTTAGAACCTCAACCTCAATGAGAAATTTGAACCCATCTGATATTGAGAGGATGGTTTCGTTGAAGGGAATGATTATAAGGTGTAGCTCAATCATACCGGAGATTAGGGAAGCTATATTTAGGTGTCTTGTGTGTGGATTCTGCTCTGACCCAGTTCCCGTGGAGAGAGGGCGAATAACTGAACCCACTATATGCTTGAGGGAAGAATGTCAATCCAGGAACTCCATGACACTGGTTCACAATCGATGCAGGTTCACTGACAAGCAAATTGTGAGGCTCCAGGAGACACCTGACGAGATACCTGAAGGAGGAACACCTCACACAGTTAGCTTGCTGGTGCATGACAAGTTGGTGGATACTGGAAAGCCAGGTGATAGAGTTGAGGTGACTGGTATTTATAGGGCTATGAGTGTCAGGGTTGGACCTACTCAGAGAACTGTTAAGTCATTGTTCAAGACGTATATTGATTGTCTTCACATAAAGAAGACCGATAAGTCCAGGATGCTGGTAGAGGATGCTATGGATGTTGATAATGGCCCAGGCAGGAATACAGAAGAAGTTATCTTTGATGAAGAAAAGGTGCCAGTGGCTCAACTGAAGGAGCTCTCAAAACGGCCAGATATATATGAAATACTGACAAAGTCATTGGCACCAAACATCTGGGAGCTAGACGATGTGAAGAAAGGTCTTCTTTGTCAGCTTTTTGGTGGCAATGCTTTGAAGTTGGCTTCTGGTGCTAGCTTCCGTGGTGATATAAATATTCTTCTTGTTGGTGATCCAGGGACAAGCAAGTCCCAGCTACTTCAATACATTCACAAACTATCTCCACGTGGCATTTACACCAGTGGAAGAGGAAGCTCTGCCGTTGGATTGACTGCCTACGTAACCAAGGACCCTGAAACAGGAGAAACTGTTCTAGAGAGTGGTGCCCTAGTTTTGAGTGACCGAGGTATCTGTTGTATTGATGAATTCGACAAAATGTCTGACAATGCAAGGAGCATGTTGCATGAGGTGATGGAACAACAAACCGTTTCAATAGCAAAGGCAGGTATTATTGCTTCCCTCAATGCTAGGACTTCGGTGTTGGCTTGTGCAAATCCAAGTGGGTCAAGATATAATCCTCGCTTGTCTGTCATTGACAACATACACCTTCCTCCCACACTTTTGTCCAGGTTTGATTTAATCTACTTGCTTCTTGACAAAGCTGATGAACAGACTGACAGGCGCCTTGCCAAACATATTGTGTCTCTACATTTTGAGAACCCTGAGAACATGGAGCAAGATGCCTTGGACCTTTCTACACTAACTGATTATGTTAGCTATGCCCGAAAACACATACAACCACAACTTTCTGATGAAGCTGCTGAAGAATTGACCAGAGGTTATGTGGAAATAAGAAAAAGAGGAAATTTTCCTGGGAGTAGCAAAAAGGTGATAACAGCAACACCGAGGCAGATTGAGAGTTTGATTCGCCTAAGTGAAGCATTGGCTCGGATTCGCTTCTCAGAATTGGTCGAAAAGCGTGATGTAATGGAGGCATTTCGGCTTTTGGAAGTTGCGATGCAGCAGTCTGCAACGGATCACTCTACTGGAACTATTGACATGGATCTTATTACTACTGGAGTTTCCGCAAGTGAAAGGATGAGACGAGAAAGTATGCTACAAGCAACCCGCAACATAATCATGGAGAAGATGCAGATTGGGGGACCATCTATGCGGTTATTGGAGTTATTGGAAGAATTGAAGAAACAGGACACTGGCAGCGAAGTTCATCTTACTGATCTAAGGAATGCAATTGCCACTCTGGCTACCGAAGGATTTGTTACCATGCACGGTGACAGTGTAAAAAGATCGTGA | 3069 | 0.4731 | MQLRNEKKKKNESNTMENQSSTSSTMQFLLLEQVQFLKVNDDSLLQWELVNVVDAEEEIEGFGSWDSSVSWSESDFNSSPNDAPIEEIRHLILRPDAGLQDRHDDVGDVDDESGLKNHHYHYQHHHRDDVDDDEDNYDDDDNDDDGFGYGLDDELVPWSVSGKFERQRMRKLGKRAFSKMHNSKKSPYLFVRPGCVRPSSPDDSLSSPIGNTFSSPAGRRRRLSSTPSAFATPPERRSRFASSDATPTPSRSRQRGAGTGRVPATPTSTTDDVPASSDGGDGYDMDDARPTFVWGTNISVEDVNDAIQRFLRDFREVSSSQGDDDELHLHTEGKYEKLIRLVVEIEGDSLDVDAHDVFDHDPDLYTKMVRYPLEVLALFDLVLMNTVSRLKPMFEKHVQTRIFNLRTSTSMRNLNPSDIERMVSLKGMIIRCSSIIPEIREAIFRCLVCGFCSDPVPVERGRITEPTICLREECQSRNSMTLVHNRCRFTDKQIVRLQETPDEIPEGGTPHTVSLLVHDKLVDTGKPGDRVEVTGIYRAMSVRVGPTQRTVKSLFKTYIDCLHIKKTDKSRMLVEDAMDVDNGPGRNTEEVIFDEEKVPVAQLKELSKRPDIYEILTKSLAPNIWELDDVKKGLLCQLFGGNALKLASGASFRGDINILLVGDPGTSKSQLLQYIHKLSPRGIYTSGRGSSAVGLTAYVTKDPETGETVLESGALVLSDRGICCIDEFDKMSDNARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNPRLSVIDNIHLPPTLLSRFDLIYLLLDKADEQTDRRLAKHIVSLHFENPENMEQDALDLSTLTDYVSYARKHIQPQLSDEAAEELTRGYVEIRKRGNFPGSSKKVITATPRQIESLIRLSEALARIRFSELVEKRDVMEAFRLLEVAMQQSATDHSTGTIDMDLITTGVSASERMRRESMLQATRNIIMEKMQIGGPSMRLLELLEELKKQDTGSEVHLTDLRNAIATLATEGFVTMHGDSVKRS | 1022 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mupr13583g00001 | 1022 | PANTHER | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER | 304 | 977 | IPR031327 | GO:0003677|GO:0005524|GO:0032508 | |
| Mupr13583g00001 | 1022 | FunFam | DNA helicase | 438 | 490 | - | - | |
| Mupr13583g00001 | 1022 | PRINTS | Mini-chromosome maintenance (MCM) protein 4 signature | 628 | 639 | IPR008047 | GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555 | |
| Mupr13583g00001 | 1022 | PRINTS | Mini-chromosome maintenance (MCM) protein 4 signature | 484 | 496 | IPR008047 | GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555 | |
| Mupr13583g00001 | 1022 | PRINTS | Mini-chromosome maintenance (MCM) protein 4 signature | 926 | 935 | IPR008047 | GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555 | |
| Mupr13583g00001 | 1022 | PRINTS | Mini-chromosome maintenance (MCM) protein 4 signature | 774 | 791 | IPR008047 | GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555 | |
| Mupr13583g00001 | 1022 | PRINTS | Mini-chromosome maintenance (MCM) protein 4 signature | 433 | 446 | IPR008047 | GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555 | |
| Mupr13583g00001 | 1022 | Pfam | MCM P-loop domain | 601 | 822 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
| Mupr13583g00001 | 1022 | SMART | mcm | 407 | 926 | IPR031327 | GO:0003677|GO:0005524|GO:0032508 | |
| Mupr13583g00001 | 1022 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 623 | 938 | IPR027417 | - | |
| Mupr13583g00001 | 1022 | MobiDBLite | consensus disorder prediction | 132 | 150 | - | - | |
| Mupr13583g00001 | 1022 | CDD | MCM4 | 615 | 924 | - | - | |
| Mupr13583g00001 | 1022 | SMART | AAA_5 | 654 | 804 | IPR003593 | GO:0016887 | |
| Mupr13583g00001 | 1022 | MobiDBLite | consensus disorder prediction | 189 | 288 | - | - | |
| Mupr13583g00001 | 1022 | Pfam | MCM OB domain | 411 | 540 | IPR033762 | - | |
| Mupr13583g00001 | 1022 | MobiDBLite | consensus disorder prediction | 239 | 275 | - | - | |
| Mupr13583g00001 | 1022 | Gene3D | - | 438 | 490 | - | - | |
| Mupr13583g00001 | 1022 | Gene3D | - | 297 | 406 | - | - | |
| Mupr13583g00001 | 1022 | MobiDBLite | consensus disorder prediction | 200 | 232 | - | - | |
| Mupr13583g00001 | 1022 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
| Mupr13583g00001 | 1022 | Gene3D | - | 598 | 930 | IPR027417 | - | |
| Mupr13583g00001 | 1022 | Gene3D | - | 411 | 550 | IPR012340 | - | |
| Mupr13583g00001 | 1022 | Gene3D | - | 931 | 1018 | IPR036388 | - | |
| Mupr13583g00001 | 1022 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 713 | 727 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
| Mupr13583g00001 | 1022 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 741 | 754 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
| Mupr13583g00001 | 1022 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 792 | 800 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
| Mupr13583g00001 | 1022 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 765 | 777 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
| Mupr13583g00001 | 1022 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 653 | 668 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
| Mupr13583g00001 | 1022 | Pfam | MCM AAA-lid domain | 838 | 924 | IPR041562 | - | |
| Mupr13583g00001 | 1022 | FunFam | DNA helicase | 592 | 931 | - | - | |
| Mupr13583g00001 | 1022 | Pfam | MCM N-terminal domain | 306 | 407 | IPR027925 | - | |
| Mupr13583g00001 | 1022 | MobiDBLite | consensus disorder prediction | 120 | 151 | - | - | |
| Mupr13583g00001 | 1022 | ProSiteProfiles | MCM family domain profile. | 612 | 818 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
| Mupr13583g00001 | 1022 | SUPERFAMILY | Nucleic acid-binding proteins | 330 | 561 | IPR012340 | - | |
| Mupr13583g00001 | 1022 | ProSitePatterns | MCM family signature. | 721 | 729 | IPR018525 | GO:0003677|GO:0005524|GO:0006260 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mupr13583g00001 | Mupr-Chr13583 | 2639 | 10461 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mupr13583g00001 | 198 | 1021 | Core DNA Replication Machinery Family | AT2G16440 | 74.316 | 0.0 | 1236 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mupr13583g00001 | K02212 | - | gmx:100782586 | 1486.86 |