Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1356g00003 ATGGAACCTCCTGTTGTGAGATCCAGGGGTCGCCCGCGGAAACGGAGAAGAGAAGAGGACGCAACCATCGCCGTAGATTCGAAATCGCTCCCCGAAGTGAAGAAAAGGATACCGATAGCATTGGTCGGGCGATACGTGCTGAAAGAGTTCCGCGGAAACACTGTTCTTCTCGGCAAAGTCACGCTGTACGAGCGTGGATTTTACCGAGTCGCATACGAGAGTGGCGGTTTCGAGGATTTAGATAGCAGTGAGATTCGTAGGATACTTCTCCATGACAGTTATTTCGACGATGATTTGAGTCGGAGGAAGATTGAATTAGAGGAATCAGTGTTGCCGAAGATAGCAGAGGAACCGGAGAAAGGTTCGAGCGAATTGCGCGGTAATTTATCGGTTGAGAACGAAGAGGAACGATATGAAGCGGACGGTGATTCGTCCGGTGAGGCTAGGGATCCGAGCTCCGATGTCGAAACGCCAATACCGTCGCCGCCGCCGCTGCCCCCGTCTTCCGGAACAATTGGTGTGCCGGAACCGTGCGTTTTGAATCTCTTATCAGTTTACGGTTTCCTGCGATCGTTCAGCATTCGCCTGTTTCTGAGTCCGTTTACTTTGGACGAGTTTGTTGGCGCTCTTAACTGTAAAGTATCGAACACGTTGCTTGATGCCGTTCACGTTTCGCTGATGCGTGTTTTGAGACGTCACCTTGAGAACATTTCAGCAGATGGCTCGCGGCGTGCATCAAAATGCCTTAGGTGCAGTGATTGGAGCCTGCTTGATTCTTTGACTTGGCCTGTTTTTGTGTTTCAGTATTTAGTAATTAATGGATACACAAAGGGACCTGAGTGGAAAGGATTTTATGACGAAATTTTTAATGGCGAGTATTATTTATTGTCTGCAAGTAGGAAATTGATGATATTGCAAATTCTCTGTGATGGTGTTTTGGAGTCTGAGGAGCTAAAAGCTGAAATGAACATGCGTGAAGAATCAGAGGTTGGGATGGATTACGATAATGAAGATAACCTTCCTGCCGAACATGGGCCAAGAAGAGTTCATCCAAGATATTCCAAAACAACTGCTTGCAAGGATAGTGAAACTAAGAAGTATGTTTCGGAATTGAATGCCGCTGAGGATGATGATGTTGATGGAAATGGAGATGAATGTCGCCTATGTGGCATGGATGGGACCTTGCTTTGTTGTGATGGTTGTCCTGCTGTTTATCATTCAAGGTGTATTGGTGTGATGAAGATGTATATACCAGAAGGGGCATGGTATTGTCCAGAGTGCAAAATAAATATGATTGGGCCTACAATTGCATGGGGAACATCACTTAAAGGGGCTGAAGTATTTGGAAAGGATTTGTATGGACAAGTTTTCATGGGTACTTGCGACCACTTACTGGTGCTCAATGTCAACAGTGATGAATTTTGTCTTAAATACTACAATCAGAATGACATTCCTGAAGTTCTTCAAGTCCTTTATGCATCTGAACAACATAGACCCATATATAATGGTATTTGCATGGCTGTGTTACAATATTGGAATATTCCAGAAAAATTCATACCTCTTTGTGTCACAGCTGGACCACAAGTAAACTCAACAAATACAAAGACTGATGCAAACTCCTCTAATGCATTACTTCCTCCTATGGTTGAAGAAGACCATAAAGCTGTTAGTTTGGTAAAGGAAGAATACAGCTTAATGGTTGCGAATGGGATTTGTAGTGATAATATGGTGCCATCTCTAGATGCCTCATTGGTTACCACTCAAAGTCCTGCTCCTGGAAGCAGTGGCAATGCAAGAAGTAAGGAGTCCCCTACTGTGAAATTGAAGCTTCGTGAGGAAACTGCGATGGATTCAATTGTTTCAACTGTTAACCATCAGTCTGACCCAAAGTGCCAAAATTCTGTTAATAGGTCAGCTGCAGTAGGCCCTGCCAAGTGCTCCTTGGTAAGCAGCAGCCAATTTAATAATTATGGGCACACAAATGACACAGGGTTGCCTATGAATTTGTCTTTTCAAACTAAAGGTGACCAATCTGGTTTTGGAAAGTGCAAAGGCAGTTTAACTAATGATTTTGTGTACAAGGGTTGCTCTTATAAACCACAGTCATACACTAATTACTATATGCATGGTGATTTTGCTGCATCCGCCGCTGCTAACCTGGCTGTTCTTTCTTCTGAAGATTCTAGATCAGAGGGCCATGTGTCTGACAACTTGGGGAAAGCAACATCTGGTAACACTTATTTGCTAGCAAAAGCTTTCTCACTAACGGCTTCACGCTTCTTTTGGCCAAGTTCTGAAAAGAAGCTTGTGGAGGTTCCAAGAGAGAGGTGTGGCTGGTGCCTTTCTTGTAAAGCCCTTGTTTCAAGCAAGAAAGGATGCATGTTAAATCATGCTGCTCTAAGTGCAACCAAAAGTGCAATGAAAATCCTTTCTGGTCTTGCTCCTGTAAGGAGTGGAGAAGGAATCATCCCCAGCTTTGCAACATATGTTATATATATGGAGGAAAGTTTACGTGGTTTAATAGTTGGGCCCTTTCTAAGTGAATATTATAGAAAGCAATGGCGTAAACAAGTGGAACAGGCCACATCATTTAGTTGTATAAAGCCCCTTTTACTCAAACTTGAGGAAAACATTCGAACAATTGCTTTTTGTGGGGACTGGGTGAAGTTGGTGGATGATTGGTTGGTTGAATTTTCTACAATGCAAAGTGCTGCATGTACCCTTGGAACAACACAGAAACGCGCAACATGTGGGAGGCGTAAGAAACAGTTATCTATCAATAAAGTTACAGCTGGTGGTTGCCACGAAAATTTTACATGGTGGCATGGCAACAAATTTACGAAATCTGTATTTCAGAAAGCTGTTTTGCCAAAATCCATGGTCAGAAAAGCAGCCCGCCAAGGTATATTTTATGCTGATGGCTCCGAGATTCCTAAAAGAAGCAGACAGCTAGTTTGGAGAGCTGCAGTTCAAATGAGTAGGAATGCATCACAGCTGGCACTTCAGGTCCGATATCTAGATTTTCATATCAGATGGAGTGATCTGATTCGTCCTGAGCATAACCTCCAGGATGGGAAAGGTCAAGATACTGAAGCTTCTGCTTTTAGGAATGCAAATATTCGTGATAAAAAAATTGCTGAGGGCAAAATATTTTACAGAGTAGCCTTTGGGAGCCAAAAGCATCTTCCTTCTCGGTCTATGCCCATACATAAAGAATCTACCCCTTGCAAGGGTTATTGTCACACGGGTTGTTCCGTGAGCTCAACAGTCTCTACATGTGAAGAAGTTGAGTTCTTAGCCACATGCAAACAATGCCATCATGCCAAATTACTTACTCAAAAAGAGTCTTGTAATGAATCTCCAACTAGTCCCTTACTCTTACAAGGACAAGAACGTAGCTCTTCGACAGTTGTGAAGGGGCCAAGGCCTAAAAGTTATGGTCAAGGATTGATGTCTACTAGGACGAAGAATAGTCGACCTGACATGAAGCAAGTTGCTTCTTTGGAAGCAAAAAGCCGTTGCAGAAGTTGTTCTTGGGGTATTATATGGAAAAAGAAGAATAATGAAGATACAGGCTTTGATTTCAGGCTCAAGAACATACTTCTAAAAGGTGGTTCAGGCATGCCTCAATTGGAGCCTGTTTGTCGCTTGTGCCATAAATCATATAGGTCTGATCTAATGTACATTTGCTGTGAAACATGCAAAAATTGGTATCATGCTGAAGCTGTTGAACTTGAAGAGTCCAAACTTTTTGATGTGCTGGGTTTCAAATGTTGCAAGTGTCGCAGGATAAAGTCGCCTGTGTGTCCTTATTCTGATTTGTTGTACAAGATGCAAGAGGGGAAGAAGTCACACTTGAGGGCTTCAAAGAAAGAGTACTTTGGAGCAGATTCTGATTCTGGTACACCTATTGACACGAGATCATGTGAGCCTGCAACTCCTATCTATCCTGCAGAGGATGTCTCTAGACAAGACATGCTGTTCTCCCTTTCAAGTGTTGAGCTGATTACAGAACCAAAGTTAGATGCAGATGTTGAGGGTAATACAGTCTCTGGGCTAGGGCTTCCGAAATTACCTTGTATAGAATATGGCTCTGCTGACTGCAATCTTCTGCATGATTCTGAAATTGTAAATTATGAATCCGTTGATTTTGAACCTCATACCTACTTCTCTCTGACTGAGCTGCTCCACCAAGAAGAAAATAGTCAATTTGAGGAAGCTAATGCATGTGGGGACTTGTCAGGATATTTGAAAAATTCTTGTACATTAGGTGTTCCTGAAGAATGTGGGACTGTTAATTTAGCATCCAAGTGTGAACCTACAATTTCGTTACAAGGAAATGTGAATAATTGTGAGCAATGTTCAGGAAAGGAGCCAGCCCCTGATCTGTCTTGTCAGACTTGTGGGATTTGGATTCACAGCCAATGTTCACCTTGGGTTGAATCACCATCTAGGCATGGAAGTTGGAGATGTGGTCGGTCAAAATTGAAACCTTCACCTCGGATCAGTAGTGAGCTTCCCTTTTCCCCGGCCCCACCAAAAGTCATTCTTTATACATTTCCGGTGCCTTGA 4572 0.4296 MEPPVVRSRGRPRKRRREEDATIAVDSKSLPEVKKRIPIALVGRYVLKEFRGNTVLLGKVTLYERGFYRVAYESGGFEDLDSSEIRRILLHDSYFDDDLSRRKIELEESVLPKIAEEPEKGSSELRGNLSVENEEERYEADGDSSGEARDPSSDVETPIPSPPPLPPSSGTIGVPEPCVLNLLSVYGFLRSFSIRLFLSPFTLDEFVGALNCKVSNTLLDAVHVSLMRVLRRHLENISADGSRRASKCLRCSDWSLLDSLTWPVFVFQYLVINGYTKGPEWKGFYDEIFNGEYYLLSASRKLMILQILCDGVLESEELKAEMNMREESEVGMDYDNEDNLPAEHGPRRVHPRYSKTTACKDSETKKYVSELNAAEDDDVDGNGDECRLCGMDGTLLCCDGCPAVYHSRCIGVMKMYIPEGAWYCPECKINMIGPTIAWGTSLKGAEVFGKDLYGQVFMGTCDHLLVLNVNSDEFCLKYYNQNDIPEVLQVLYASEQHRPIYNGICMAVLQYWNIPEKFIPLCVTAGPQVNSTNTKTDANSSNALLPPMVEEDHKAVSLVKEEYSLMVANGICSDNMVPSLDASLVTTQSPAPGSSGNARSKESPTVKLKLREETAMDSIVSTVNHQSDPKCQNSVNRSAAVGPAKCSLVSSSQFNNYGHTNDTGLPMNLSFQTKGDQSGFGKCKGSLTNDFVYKGCSYKPQSYTNYYMHGDFAASAAANLAVLSSEDSRSEGHVSDNLGKATSGNTYLLAKAFSLTASRFFWPSSEKKLVEVPRERCGWCLSCKALVSSKKGCMLNHAALSATKSAMKILSGLAPVRSGEGIIPSFATYVIYMEESLRGLIVGPFLSEYYRKQWRKQVEQATSFSCIKPLLLKLEENIRTIAFCGDWVKLVDDWLVEFSTMQSAACTLGTTQKRATCGRRKKQLSINKVTAGGCHENFTWWHGNKFTKSVFQKAVLPKSMVRKAARQGIFYADGSEIPKRSRQLVWRAAVQMSRNASQLALQVRYLDFHIRWSDLIRPEHNLQDGKGQDTEASAFRNANIRDKKIAEGKIFYRVAFGSQKHLPSRSMPIHKESTPCKGYCHTGCSVSSTVSTCEEVEFLATCKQCHHAKLLTQKESCNESPTSPLLLQGQERSSSTVVKGPRPKSYGQGLMSTRTKNSRPDMKQVASLEAKSRCRSCSWGIIWKKKNNEDTGFDFRLKNILLKGGSGMPQLEPVCRLCHKSYRSDLMYICCETCKNWYHAEAVELEESKLFDVLGFKCCKCRRIKSPVCPYSDLLYKMQEGKKSHLRASKKEYFGADSDSGTPIDTRSCEPATPIYPAEDVSRQDMLFSLSSVELITEPKLDADVEGNTVSGLGLPKLPCIEYGSADCNLLHDSEIVNYESVDFEPHTYFSLTELLHQEENSQFEEANACGDLSGYLKNSCTLGVPEECGTVNLASKCEPTISLQGNVNNCEQCSGKEPAPDLSCQTCGIWIHSQCSPWVESPSRHGSWRCGRSKLKPSPRISSELPFSPAPPKVILYTFPVP 1523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1356g00003 1523 ProSitePatterns Zinc finger PHD-type signature. 386 427 IPR019786 -
Mupr1356g00003 1523 MobiDBLite consensus disorder prediction 1121 1141 - -
Mupr1356g00003 1523 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 280 323 IPR028942 -
Mupr1356g00003 1523 SMART testlast3 176 236 IPR018501 -
Mupr1356g00003 1523 ProSiteProfiles DDT domain profile. 176 236 IPR018501 -
Mupr1356g00003 1523 MobiDBLite consensus disorder prediction 1 22 - -
Mupr1356g00003 1523 MobiDBLite consensus disorder prediction 585 602 - -
Mupr1356g00003 1523 Pfam PHD-finger 386 428 IPR019787 -
Mupr1356g00003 1523 MobiDBLite consensus disorder prediction 115 135 - -
Mupr1356g00003 1523 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1209 1268 IPR013083 -
Mupr1356g00003 1523 SMART PHD_3 1450 1495 IPR001965 -
Mupr1356g00003 1523 SMART PHD_3 1214 1262 IPR001965 -
Mupr1356g00003 1523 SMART PHD_3 385 428 IPR001965 -
Mupr1356g00003 1523 CDD PHD_SF 1214 1261 - -
Mupr1356g00003 1523 MobiDBLite consensus disorder prediction 585 605 - -
Mupr1356g00003 1523 MobiDBLite consensus disorder prediction 1121 1160 - -
Mupr1356g00003 1523 MobiDBLite consensus disorder prediction 156 170 - -
Mupr1356g00003 1523 SUPERFAMILY FYVE/PHD zinc finger 1210 1268 IPR011011 -
Mupr1356g00003 1523 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 377 432 IPR013083 -
Mupr1356g00003 1523 ProSiteProfiles Zinc finger PHD-type profile. 383 430 IPR019787 -
Mupr1356g00003 1523 MobiDBLite consensus disorder prediction 115 170 - -
Mupr1356g00003 1523 Pfam DDT domain 178 233 IPR018501 -
Mupr1356g00003 1523 SUPERFAMILY FYVE/PHD zinc finger 362 429 IPR011011 -
Mupr1356g00003 1523 PANTHER PHD FINGER FAMILY PROTEIN 36 1462 - -
Mupr1356g00003 1523 SUPERFAMILY FYVE/PHD zinc finger 1444 1495 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1356g00003 Mupr-Chr1356 22190 29702 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1356g00003 28 516 PHD Transcription Factor Family AT5G35210 48.549 8.31e-140 467
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Mupr1356g00003 DDT 6.4e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1356g00003 - - gmx:100808614 1803.49