Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1355g00003 ATGGTCTTCCCGTCCCTTCCAATCTATCTAGATCCACCCAACTGGTCACAACAGCAACCTAATCAGCCAGCAGGAGTTGGCACCCAGAATCAACAGATTCCACCGCCTCCACGGGCGCCACCTTCAACGGTGGCGACTGGTATCGGAGGAGGTGGTGGCTATCAAGGTTCTATCAGACCAGGATCAATGGCTGATAGAGCTAGGATGGCCAAGATACACCAACCCGATGCAGCACTTAAATGTCCACGATGTGAATCTACAAACACCAAGTTCTGCTACTACAACAACTACAGTCTCTCGCAGCCTCGCCACTTTTGCAAGACTTGCCGTCGTTACTGGACCAGAGGAGGTGCACTCAGAAGCGTGCCAGTTGGAGGTGGCTGTAGAAGGAACAAAAGAAGCAAAGGGAACAGTGCTAGATCAAAGTCTCCTATGAAACCTGCAACAGGTTCTACCTCTGCAAGTGCTAATTCTTCTTCTAGTGGCTGCACTACTCATGATCATGTGATGATCTCTCAATTGCCAACTCCAACACCAACTCAATTTCCATTCTTGGCCTCTTTACATCATTATAATAGTGACTACGCTTCTGGGGTCATTGGCTCGCATTTTGGAACAATCCCAACACCTTTGGTGGCTAGAAATGGCAACACTAGTGCTGGCAGTGATGTTGAGTTTCAAATTGGCACTAGTTCAGCTTTATCACTTGGTAATAGTGGTGGCTCTATGTTTCCAAATGGCCTTGGTGAGCAATGGCGGATGAACAATCTGCAACAAGTTCAACAACATCAGTTCCCTTTCTTGAGTACTAGTTTGGAGCCACAAATTGGGGTGTTTCAGTTCGGTGGAGAAAATAATAATGCTGAACCGCCAAGTTATGCAAAAGATGGAGGCCGGTTTAATATTCGTTCTAAGATGGATTCTATTTCTAGTGTAAGTGGAATAATGCCTCAGCTTAACACAATAAAACTGGAAGAAAATCAAGGTTTGAGTTTGCCAAAAAATCTCTTGAGTAGTTCGGGAAATGATGTATTTTGGAATGGAAGTGGTAATGCATGGAGTGAAGTTCCTAGTTTCACTCCATCACCGAACCACTTGTTGTGA 1104 0.4538 MVFPSLPIYLDPPNWSQQQPNQPAGVGTQNQQIPPPPRAPPSTVATGIGGGGGYQGSIRPGSMADRARMAKIHQPDAALKCPRCESTNTKFCYYNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKRSKGNSARSKSPMKPATGSTSASANSSSSGCTTHDHVMISQLPTPTPTQFPFLASLHHYNSDYASGVIGSHFGTIPTPLVARNGNTSAGSDVEFQIGTSSALSLGNSGGSMFPNGLGEQWRMNNLQQVQQHQFPFLSTSLEPQIGVFQFGGENNNAEPPSYAKDGGRFNIRSKMDSISSVSGIMPQLNTIKLEENQGLSLPKNLLSSSGNDVFWNGSGNAWSEVPSFTPSPNHLL 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1355g00003 367 MobiDBLite consensus disorder prediction 123 172 - -
Mupr1355g00003 367 MobiDBLite consensus disorder prediction 11 32 - -
Mupr1355g00003 367 MobiDBLite consensus disorder prediction 140 172 - -
Mupr1355g00003 367 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 69 246 IPR045174 GO:0003700|GO:0006355
Mupr1355g00003 367 ProSiteProfiles Zinc finger Dof-type profile. 79 133 IPR003851 GO:0003677|GO:0006355
Mupr1355g00003 367 ProSitePatterns Zinc finger Dof-type signature. 81 117 IPR003851 GO:0003677|GO:0006355
Mupr1355g00003 367 MobiDBLite consensus disorder prediction 11 56 - -
Mupr1355g00003 367 Pfam Dof domain, zinc finger 77 133 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1355g00003 Mupr-Chr1355 17597 18970 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1355g00003 1 183 C2C2-Dof Transcription Factor Family AT2G37590 48.744 1.68e-46 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mupr1355g00003 zf-Dof 2.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1355g00003 - - gmx:102662809 581.252