Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1354g00001 ATGGTCAATCCCAAGCCGAGAACTCTCCATTTCGCCATTGTCCAACAAGGTCCATTATGGATTGTATTCGAGCGTAACATGGTCATTGAGTTGAGGCAAGAGCTCTTGATTTCCTCCAAGACCATTGATGGTTGTGGTACGAATGTGCAGATCAAGAATGGTGATGGCCTCACCATGCAGTACAATGTCATCATCCATGGAATTTGCATCAAGAAAATCATGCCCAAAGATGGTGGCATGATTAGAGACTCCTACAACCACTTTGGGTTGAGAACAAGGAGCGACAGTGACGCCATCTCCTTATTGGGAGTATCCAATATTTGGATAGATCATGTTTCCCTCTCTAACTTCATCAACAATGTTATCGATATCATCAAAGGCTCTACCACCGTCGCCATCTCAAATTGCCACATGACCAAACATAACGATCCTAAGTTGAGGAAGCCTACAAAATTTCTCTCAACGCCTATATCCCAACCTGTGAAGGTGTCACTAATGAACTCAATCTCCATGTTCATTCAGCATGGGAAAATAGCACAACTACAAGGAGGAAGGGATGTTGGAAATGATAGAGAAGAGTTTGACTAG 588 0.432 MVNPKPRTLHFAIVQQGPLWIVFERNMVIELRQELLISSKTIDGCGTNVQIKNGDGLTMQYNVIIHGICIKKIMPKDGGMIRDSYNHFGLRTRSDSDAISLLGVSNIWIDHVSLSNFINNVIDIIKGSTTVAISNCHMTKHNDPKLRKPTKFLSTPISQPVKVSLMNSISMFIQHGKIAQLQGGRDVGNDREEFD 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1354g00001 195 PANTHER PECTATE LYASE 18-RELATED 1 143 IPR045032 GO:0030570
Mupr1354g00001 195 SUPERFAMILY Pectin lyase-like 2 142 IPR011050 -
Mupr1354g00001 195 Gene3D - 1 166 IPR012334 -
Mupr1354g00001 195 SMART amb_all 26 193 IPR002022 -
Mupr1354g00001 195 PRINTS Pollen allergen Amb family signature 33 49 IPR018082 -
Mupr1354g00001 195 PRINTS Pollen allergen Amb family signature 95 116 IPR018082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1354g00001 Mupr-Chr1354 6679 7950 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1354g00001 1 143 Polysaccharide Lyase AT1G14420 56.849 4.80e-51 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1354g00001 K01728 - gmx:100785801 207.223