Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13546g00002 ATGGGTTCCCCAAAAGAGGATGAGAGTGAGACACAAAAGGGAAGAGAAGATAGAGCTTTTTCCATAGGCATCATTTTGAGATATGCTGATTGGATTGATGTTATGCTCATGTTAATGGGTGCTTTGGGAGCAATAGGAGATGGCATGTCCACAAACGTTTTGTTGCTGTTTGCTAGCCGTATCATGAACAGCTTAGGTTACCAACAAAGTAGTAACACTTCCATGGCTGAGGTTGAAAAGTGCAGCTTATATTTTGTCTACTTGGGATTAGCAGTTATGGTGGTGGCCTTCATGGAAGGGTATTGCTGGAGCAAAACAAGTGAGAGGCAGGTGTTGAGAATTCGTTACAAGTACTTAGAAGCTGTCCTAAGACAAGAAGTAGGGTTTTTCGATTCGCAAGAAGCAACCACTTCTGAAATCATCAATAGCATATCAAAGGACACTTCTCTCATCCAAGAAGTTCTAAGTGAAAAGGTGCCCCTATTTTTCATGCATTCATCATCATTCATGTCTGGGGTTGCGTTTGCCTCGTATTTCTCTTGGAGGTTGGCTTTAGTAGCATTTCCAACGCTGCTTTTGCTTATTATCCCTGGGATGATTTATGGCAAATACCTTATCTATTTGTCAAAATCTTCTGTGAAAGAATATGGCAAAGCAAATTCCATTGTGGAACAGGCACTTAGCTCCATCAAAACTGTTTATTCATTCACTGCGGAGAAGAGAATCATGGGGAGATATTCAGACATATTGAGTAGAACCTCAAGGCTTGGAATCAAGCAAGGCATAGCTAAGGGTCTTGCAGTAGGAAGCACAGGTCTCTCTTTTGCAATATGGGCTTTTATTGCTTGGTATGGAAGCCGTTTGGTTATGTACAAAGGTGAAAGTGGTGGAAAGATCTATGCATCAGGAATTTCCTTCATAATGTGTGGACTGTCTCTTGGAGTGGTACTTCCTGATTTGAAGTACTTCACGGAAGCATCTGTTGCTGCTTCACGAATATTTGACATGATTGATCGAATACCATTAATTGATGGTGAAGACACAAAAGGACTTGTGTTAGAGGACATTAGTGGCAAGCTAGAATTTGAGCATGTAAAATTCACATACCCTTCTCGTCCAGAAATGGTTGTGCTCAGTGATTTCAATCTTCAAGTGGAAGCAGGGAAAACGGTTGCTCTTGTTGGTGCAAGTGGAAGTGGCAAGTCCACTGCAATAGCATTAGTGCAAAGATTTTATGATGCAAATGAGGGTGTTGTGAGGGTTGATGGTGTAGACATAAAAAGCCTACACTTGAAGTGGATAAGAGGGAAAATGGGGCTTGTGAGTCAAGAACATGCAATGTTTGGGACATCCATAAAGGAGAATATTATGTTTGGGAAGCCTGATGCTACCATGGATGAAATAGTTGCTGCAGCCTCAGCAGCCAATGCTCATAACTTCATAAGGCAGCTTCCTCAAGGTTATGAAACCAAGATTGGAGAAAGGGGAGCACTTCTTTCAGGAGGTCAAAAGCAGCGAATAGCCATTGCAAGAGCAATCATAAAGAACCCTGTAATTCTCCTACTCGATGAAGCAACTAGTGCTCTTGACTCTGAATCAGAATTACTGGTACAGAATGCCCTCGATCAGGCCTCCATGGGGAGGACTACATTGGTTGTTGCACACAAGCTATCAACTATTCGAAATGCAGACCTGATAGCGGTTGTCAGTGGTGGATGCATCATTGAAACAGGCACACACAATGAACTCATCAATAGACCAAATGGCCACTATGCAAAACTGGCAAAATTACAGACACAATTGAGCATGGATGACCAAGACCAAAATCCAGAACTAGGTGCTCTTTCTGCAGCAAGAAGCAGTGCAGGTAGACCAAGCACAGCAAGGTCAAGCCCTGCCATATTTCCAAAGTCACCATTGCCCGATGAAACAACCACCTCATCTCCAGTATATCACCCTCCTCCACCTTCTTTCACAAGGCTTCTCTCTCTGAATTCTCCTGAATGGAAACAAGGCCTAATTGGAACACTCTCAGCCACAGCCTTTGGCTCAGTTCAACCCCTATATGCCTTAACCATTGGGGGTATGATTTCTGCATTCTTTGCTGAAAGCCATCAAGAAATGAAGCACAGAATCAGGACTTATTCTTTGATTTTCTGTTCCCTATCCCTTGCTTCTATTATCCTCAATCTCTTGCAACATTACAATTTTGCATACATGGGAGCCAAGTTAACCAAAAGGATAAGACTGCGCATGCTGGAGAATATCTTGACCTTTGAAACTGCTTGGTTTGATGAGGAACAAAACTCCAGTGGAGCATTATGCTCAAGGTTAAGCAATGAGGCTTCCATGGTTAAGTCCCTTGTAGCAGATAGACTCTCCTTACTAGTTCAAACCACTTCTGCTGTCACCATTGCAATGATTATAGGCCTCGCCGTGGCTTGGAAGCTTGCTCTTGTTATGATAGCAGTGCAGCCACTCACAATCCTTTGCTTTTATACAAGAAAAGTGTTGCTCTCCACACTCTCAACCAAATTTGTTAAGGCACAGAATCAAAGTACACAAATTGCAGTAGAGGCAGTTTATAACCACAGAATTGTGACTTCATTTGGGAGCATTACAAAAGTTCTAAGGCTATTTGACGAGGCGCAAGAGGCGCCAAGGAAGGAGGCAAGGAAGAAGGCATGGCTAGCTGGCATAGGAATGGGTTCTGCTCAGTGCCTAACGTTCATGTCATGGGCTTTGGATTTCTGGTATGGTGGCACTTTGGTGGAAAGGAAAGAAATATCAGCTGGGGATGTGTTCAAAACATTTTTTGTGTTGGTTAGCACTGGCAAGGTCATAGCTGATGCTGGAAGCATGACTTCTGACCTTGCCAAAAGCTCAACAGCAGTGGCATCAGTGTTTGAAATTCTTGACCGGAAATCATTAATTCCCAAGGCTGGAGATAACACTAATGGCATTAAGTTGGAAAAGATGAGTGGAAGGATAGAATTGAAGAATGTTGATTTTGCCTATCCAAGCAGGGCAGGGACCCCAATTTTGCGCAAGTTTTGCTTGGAAGTGAAGCCAGGAAAAAGTGTTGGACTGGTTGGAAAAAGTGGGTGTGGAAAATCAACAGTGATTGCCTTGATTCAAAGATTCTATGACGTTGAGAGAGGTTCAGTTAAAGTGGATAATGTGGACATAAGGGAGTTAGACATTCACTGGTACAGGCAGCACACGGCACTGGTTAGCCAAGAACCTGTGATATATTGTGGCAGCATACGTGACAACATTTTGTTTGGGAAGCAAGATGCAACAGAGAATGAAATAGTCCAGGCTGCAAGAGCTGCAAATGCTCATGAATTCATTTCATCATTGAAAGATGGATATGAAACTGAATGTGGAGAAAGGGGTGTGCAGCTATCAGGAGGGCAAAAGCAAAGAATAGCAATTGCAAGGGCCATAATTCGCAACCCAAAGATACTACTTCTAGATGAGGCAACAAGTGCCCTGGACGTGCAATCAGAACAAGTTGTGCAAGAAGCACTTGATAGGACTATGGTTGGGAGAACCACCATTGTTGTGGCACATAGGCTTAACACCATCAAAGAGCTTGATTCAATTGCTTATGTGTCAGAGGGAAAGGTTCTGGAGCAAGGAACCTATGCTCATCTTAGGCACAAGAGAGGTGCTTTCTTCAACCTTGCCAGCCATCAAATCCAAACTTAG 3714 0.4308 MGSPKEDESETQKGREDRAFSIGIILRYADWIDVMLMLMGALGAIGDGMSTNVLLLFASRIMNSLGYQQSSNTSMAEVEKCSLYFVYLGLAVMVVAFMEGYCWSKTSERQVLRIRYKYLEAVLRQEVGFFDSQEATTSEIINSISKDTSLIQEVLSEKVPLFFMHSSSFMSGVAFASYFSWRLALVAFPTLLLLIIPGMIYGKYLIYLSKSSVKEYGKANSIVEQALSSIKTVYSFTAEKRIMGRYSDILSRTSRLGIKQGIAKGLAVGSTGLSFAIWAFIAWYGSRLVMYKGESGGKIYASGISFIMCGLSLGVVLPDLKYFTEASVAASRIFDMIDRIPLIDGEDTKGLVLEDISGKLEFEHVKFTYPSRPEMVVLSDFNLQVEAGKTVALVGASGSGKSTAIALVQRFYDANEGVVRVDGVDIKSLHLKWIRGKMGLVSQEHAMFGTSIKENIMFGKPDATMDEIVAAASAANAHNFIRQLPQGYETKIGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESELLVQNALDQASMGRTTLVVAHKLSTIRNADLIAVVSGGCIIETGTHNELINRPNGHYAKLAKLQTQLSMDDQDQNPELGALSAARSSAGRPSTARSSPAIFPKSPLPDETTTSSPVYHPPPPSFTRLLSLNSPEWKQGLIGTLSATAFGSVQPLYALTIGGMISAFFAESHQEMKHRIRTYSLIFCSLSLASIILNLLQHYNFAYMGAKLTKRIRLRMLENILTFETAWFDEEQNSSGALCSRLSNEASMVKSLVADRLSLLVQTTSAVTIAMIIGLAVAWKLALVMIAVQPLTILCFYTRKVLLSTLSTKFVKAQNQSTQIAVEAVYNHRIVTSFGSITKVLRLFDEAQEAPRKEARKKAWLAGIGMGSAQCLTFMSWALDFWYGGTLVERKEISAGDVFKTFFVLVSTGKVIADAGSMTSDLAKSSTAVASVFEILDRKSLIPKAGDNTNGIKLEKMSGRIELKNVDFAYPSRAGTPILRKFCLEVKPGKSVGLVGKSGCGKSTVIALIQRFYDVERGSVKVDNVDIRELDIHWYRQHTALVSQEPVIYCGSIRDNILFGKQDATENEIVQAARAANAHEFISSLKDGYETECGERGVQLSGGQKQRIAIARAIIRNPKILLLDEATSALDVQSEQVVQEALDRTMVGRTTIVVAHRLNTIKELDSIAYVSEGKVLEQGTYAHLRHKRGAFFNLASHQIQT 1237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13546g00002 1237 FunFam ABC multidrug transporter SitT 987 1235 - -
Mupr13546g00002 1237 FunFam Putative ABC transporter B family member 8 640 982 - -
Mupr13546g00002 1237 SUPERFAMILY ABC transporter transmembrane region 25 344 IPR036640 GO:0005524|GO:0016020
Mupr13546g00002 1237 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 350 598 IPR027417 -
Mupr13546g00002 1237 CDD ABC_MTABC3_MDL1_MDL2 361 598 - -
Mupr13546g00002 1237 PANTHER ABC TRANSPORTER B FAMILY 6 685 IPR039421 -
Mupr13546g00002 1237 CDD ABC_MTABC3_MDL1_MDL2 997 1234 - -
Mupr13546g00002 1237 SMART AAA_5 1024 1216 IPR003593 GO:0016887
Mupr13546g00002 1237 SMART AAA_5 387 579 IPR003593 GO:0016887
Mupr13546g00002 1237 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 360 596 IPR003439 GO:0005524
Mupr13546g00002 1237 ProSitePatterns ABC transporters family signature. 499 513 IPR017871 GO:0005524|GO:0016887
Mupr13546g00002 1237 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 997 1233 IPR003439 GO:0005524
Mupr13546g00002 1237 Pfam ABC transporter transmembrane region 38 308 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr13546g00002 1237 Pfam ABC transporter transmembrane region 674 943 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr13546g00002 1237 SUPERFAMILY ABC transporter transmembrane region 660 974 IPR036640 GO:0005524|GO:0016020
Mupr13546g00002 1237 Gene3D ABC transporter type 1, transmembrane domain 25 902 IPR036640 GO:0005524|GO:0016020
Mupr13546g00002 1237 CDD ABC_6TM_Pgp_ABCB1_D1_like 37 333 - -
Mupr13546g00002 1237 Gene3D - 350 599 IPR027417 -
Mupr13546g00002 1237 Gene3D - 987 1237 IPR027417 -
Mupr13546g00002 1237 Pfam ABC transporter 378 527 IPR003439 GO:0005524
Mupr13546g00002 1237 ProSitePatterns ABC transporters family signature. 1136 1150 IPR017871 GO:0005524|GO:0016887
Mupr13546g00002 1237 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 673 960 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr13546g00002 1237 MobiDBLite consensus disorder prediction 616 652 - -
Mupr13546g00002 1237 FunFam ABC transporter B family member 4 350 606 - -
Mupr13546g00002 1237 MobiDBLite consensus disorder prediction 616 633 - -
Mupr13546g00002 1237 Pfam ABC transporter 1018 1164 IPR003439 GO:0005524
Mupr13546g00002 1237 CDD ABC_6TM_Pgp_ABCB1_D2_like 662 978 - -
Mupr13546g00002 1237 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 986 1234 IPR027417 -
Mupr13546g00002 1237 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 38 325 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr13546g00002 1237 FunFam ABC transporter B family member 1 24 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13546g00002 Mupr-Chr13546 7298 16499 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13546g00002 10 1227 Calmodulin-binding Proteins AT2G36910 43.291 0.0 971
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13546g00002 K05658 - gmx:100801088 2197.55