Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13537g00004 ATGGCGTTGGTGGAGGCTCCTCATGCCTTCTTGTGTATCATGAAGAAGAGACAGGTGGTGGTGAAAAGAGATGGGGCCAACACTTCATCTTCAGTGATCAGAAACATAAGATATGGTGAGTGCCAGAAGAATCATGCAGCCAATATTGGAGGGTATGCTGTGGATGGTTGCAGGGAGTTCATGGCTAGTACAGGGGAGGGAGCTGGTGGGGCACTTACATGTGCTGCTTGTGGCTGCCACAGGAACTTCCACAGAAGGGAAGTGCAAACTGAGGTAATTCGGTTGAGAAAGGCAAGAGATATGAACTGTATATTCCTCCTTGTCATGCCTTCAAGGCTAGAAAACAGTCATGGGCATGATCTTGCTACTAGCTTTAGAAAATTAATGCTAAGACCTGAACTTCGATGA 408 0.4681 MALVEAPHAFLCIMKKRQVVVKRDGANTSSSVIRNIRYGECQKNHAANIGGYAVDGCREFMASTGEGAGGALTCAACGCHRNFHRREVQTEVIRLRKARDMNCIFLLVMPSRLENSHGHDLATSFRKLMLRPELR 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13537g00004 135 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 37 88 IPR006456 -
Mupr13537g00004 135 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 27 110 - -
Mupr13537g00004 135 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 38 87 IPR006456 -
Mupr13537g00004 135 Pfam ZF-HD protein dimerisation region 36 88 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13537g00004 Mupr-Chr13537 14181 18672 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13537g00004 14 93 Zinc finger-homeobox gene family AT1G18835 74.074 3.14e-34 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Mupr13537g00004 ZF-HD_dimer 1.4e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13537g00004 - - pcin:129319329 143.28