Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13530g00008 ATGTCAAAGCAAGTTATCCTCATCCTGGGAATACTTACTCCAAACTCACAATTTATGACACTCACTATGGATAAATTTCTGAACGAGATGGGAAAGGAGAAGCCAATCAGTTTTACTGAGCAGCATCTAAGAATTGCAACTGATAACTACTCTTACTTGTTGGGGTCAGGAGGTTTTGGAGCAGTCTATAAGGGAATTTTTAGTGACGGAACCATTGTAGCTGTGAAGGTTCTACATGGGGGTTCTAACAAGAAAATTGAGGAGCAGTTTATGGCTGAAGTGGGGACAATTGGCAAAATTCATCACTTCAACCTGGTTCGTCTCTATGGATTTTGCTTTGAAAAAACACTTGATAGCACTGTTGGGACAGCCAAAGGCATTGCTTACTTGCATGAAGAATGCCAACAGAGAATAATCCATTATGACATCAAACCAGGAAATATTCTCTTGGACAGCAACTTCAATCCTAAAGTTGCTGATTTTGGTTTAGCCAAGCTTTGCAATAGGGAAAATACTCATATAACCCTCACTAAGGCTAGGGGAACTCCTGGTTATGCTGCACCTGAGCTTTGGATGCCTAATTTTCCTGTAACTCACAAATGTGATGTTTACAGCTTTGGCATCCTGTTATTTGAAATAATAGGCAGGAGAAGAAGCCTTGACATTAACCGTCCTGAAAGCCAAGAGTGGTTTCCAATGTGGGTTTGGAAAAGATTTGAGGCTGAAGAAGCAAAGGAATTAATTGTAACATGTGGGATAGAAGATGAAAATAGAGAGATTGCAGAAAGAATGATTAAGGTAGCTCTGTCATGTGTTCAGTATAGGCAAGAATCAAGACCTATAATGAGCGTTGTGGTGAAAATGTTAGAGGGTTCAGTTGAAATTCCAAAACCTCTAAACCCATTTCCACACATGATTGCTGAGACTAATCCACTCCCAGCACCAGAGACCAACATTGATACAAGTACTGGTTCAGACTTTTCACTGAGGATATCGAATCCAGCCTCGCACCTGCTACTACTATTATGA 1029 0.4043 MSKQVILILGILTPNSQFMTLTMDKFLNEMGKEKPISFTEQHLRIATDNYSYLLGSGGFGAVYKGIFSDGTIVAVKVLHGGSNKKIEEQFMAEVGTIGKIHHFNLVRLYGFCFEKTLDSTVGTAKGIAYLHEECQQRIIHYDIKPGNILLDSNFNPKVADFGLAKLCNRENTHITLTKARGTPGYAAPELWMPNFPVTHKCDVYSFGILLFEIIGRRRSLDINRPESQEWFPMWVWKRFEAEEAKELIVTCGIEDENREIAERMIKVALSCVQYRQESRPIMSVVVKMLEGSVEIPKPLNPFPHMIAETNPLPAPETNIDTSTGSDFSLRISNPASHLLLLL 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13530g00008 342 SMART serkin_6 48 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr13530g00008 342 Gene3D Phosphorylase Kinase; domain 1 31 114 - -
Mupr13530g00008 342 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Mupr13530g00008 342 Pfam Protein kinase domain 122 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr13530g00008 342 ProSitePatterns Protein kinases ATP-binding region signature. 54 76 IPR017441 GO:0005524
Mupr13530g00008 342 SUPERFAMILY Protein kinase-like (PK-like) 32 290 IPR011009 -
Mupr13530g00008 342 Gene3D Transferase(Phosphotransferase) domain 1 115 301 - -
Mupr13530g00008 342 Pfam Protein tyrosine and serine/threonine kinase 53 115 IPR001245 GO:0004672|GO:0006468
Mupr13530g00008 342 ProSiteProfiles Protein kinase domain profile. 48 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr13530g00008 342 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 5 301 - -
Mupr13530g00008 342 FunFam Putative receptor-like protein kinase 103 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13530g00008 Mupr-Chr13530 29853 31138 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13530g00008 38 323 Receptor kinase-like Gene Family AT5G38280 37.771 7.19e-62 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Mupr13530g00008 Pkinase 3.2e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13530g00008 - - gmx:100819737 545.428