LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr13530g00002	ATGAGTTGTCGATTTTCTCCACCATCGTTCTATAGTTCATCTGACGATTTTCAGACTCCGGCGCAAAGCACTTTTGACAAATTTAATGGAAGTGTTGATTCCACTATGACATGGGCAGTAATAGAATCCATTGATAGCTTCAAGAGAAACATTGTGTTATATTCTCATCTTTCTGCAACACAATCATCCTGCATGTGGTTGATTAGAAAAACTAATTTTTGTAGTTATATTCTGTTTCAATTTTCAGTTTCTGGAGTGGTGGTACTAATAGCTATTATAGCAATAGTGTATACCATTATTGAGTGCTTGAAGAAAGCAGGAGCAGCAATTCCTGCATACACCCAACTTCCGAGTACAGAGAAGAAACCTAAAGCTTCAAAGTCATTTCCTTCGACGCGTGAAATTGAAGTAGTAATGCCACCAGATTCCACAGTTCAAGGTTCAAAAGCGGAGTTTGCAACAATGGAAAGGTTCCTAAGCAACATCAACAAGGAGAAGCCCATCAGATTCTCTCCTGAGCAACTTGATGTAATTACATGGAACTACTCAACCATATTGGGTTCTGGTGCTTTTGGAGTAGTCTACAAAGGGGAATTGTCCAAAGGAGAATATGTGGCTGTGAAAGTCATCAAAAGTTTGGACAAGGGAATGAAAGAGCAATTCAAAGCAGAAGTTAGCACCATTGGAAGAACTTACCACATCAATCTAGTTAAACTTTATGGCTTTTGCTTCCACCGTGACAAGCGAGCTCTTGTTTATGAGTATGTGGAAAATGGGTCTCTCAACAAGTACTTGTTTGGCAGCCAGAACCGGGACATTGAGTTGGGGAAGCTTCATGAGATTGCAATTGGAACAGCAAAAGGAATTGCTTATTTACACGAGGAATGTCAACAAAGAATAATTCATTATGATATTAAACCAGAGAATGTTCTTCTTGACATGAACTTGAAACCAAAGGTAGCAGATTTTGGCCTCGCAAAGCTTTGCAGCAGAGAAGATAACGTTTCGGTCAATACACACTTTAGAGGAACAATGGGATATGCTGCACCAGAAATGTGGAAGCCTTATCCGGTGACTCACAAGTGCGATGTTTATAGTTTTGGTATTCTCCTCTTTGAAATTGTAGGAAGGAGAAGGCATTTTGATGATAACTGCAGTGAATCACAACAATGGTTTCCAAAATGGACATGGGATATGTTCGAGAATAATGAATTATCCGTAATGCTTTCACTTTGTGGAATTGAAGGGAAAGAAAGAGAGAAAGCTGAGAGAATGTCAAAGGTGGCTCTATGGTGCGTTCAGTATTCACCAGATGATAGACCTCTTATGAGTACAGTGGTGAAGATGTTAGAGGGTGAAATTGAAATTTCTCCACCTCCATTTCCCTTCCAAAAATTGGAGTCTGGTAAGCCAAAATTAACTCCACCAGAATCGTCCATAGAATCTGGCTCTAAAACCAAGCACAATACATTTTGGACTCAGGCGCAGAGCACTTTTGACAACTTTAGTCAAAGTGTTGATTCCACTATGAAATGGGCCGTAATAGAATCCATTATTTCTGGAGTGGTGGTACTAATAGCTATTATAGCAATAGTATATGCCATTATTGAGTGCTTGAAGAAGGCAGGAGAAGCAATTCCTGCTTATGTACAGGTTTCAAGTAAAGAGAAGGATGATAAAGATTCAAATTCATTTCCTTCAACCAGTGAATTTGAAGTAGTAGTAATACCTCCAAATTCCACAGTTCAAGGTTCAAAAGCTGAGTTTGCAACAATGGAAAGATTCCTAAGCAACATCAACAAGGAGAAACCCATCAGATTCTCTCCTGAGCAACTTGATGTAATTACATGGAACTACTCAACCATATTGGGTTCTGGTGCCTTTGGGGTTGTCTACAAAGGGGAATTGTCCAATGGAGAACATGTGGCTGTCAAAGTTATCAACAGTTTGGATATGGGAATGGAAGAGCAATTCAAAGCAGAAGTTGGCACCATTGGAAGAACTTACCATTCAGGCTTTATGGCTTCTGCTTCCACCATGAGAAGCGAGCTCTTGTCTACGAGTGTGTGGAAAATGGGTCTCTCAACACTTACCTGTTTGGAAGCCAGAACCGAGGCGTTGAGTTTGAGAAGCTTCATAAGATTGCAATTGGAACAGCAAAAGGAATTGCTTATTTACATGAGGAATGTCAACAAAGAATAA	2202	0.3978	MSCRFSPPSFYSSSDDFQTPAQSTFDKFNGSVDSTMTWAVIESIDSFKRNIVLYSHLSATQSSCMWLIRKTNFCSYILFQFSVSGVVVLIAIIAIVYTIIECLKKAGAAIPAYTQLPSTEKKPKASKSFPSTREIEVVMPPDSTVQGSKAEFATMERFLSNINKEKPIRFSPEQLDVITWNYSTILGSGAFGVVYKGELSKGEYVAVKVIKSLDKGMKEQFKAEVSTIGRTYHINLVKLYGFCFHRDKRALVYEYVENGSLNKYLFGSQNRDIELGKLHEIAIGTAKGIAYLHEECQQRIIHYDIKPENVLLDMNLKPKVADFGLAKLCSREDNVSVNTHFRGTMGYAAPEMWKPYPVTHKCDVYSFGILLFEIVGRRRHFDDNCSESQQWFPKWTWDMFENNELSVMLSLCGIEGKEREKAERMSKVALWCVQYSPDDRPLMSTVVKMLEGEIEISPPPFPFQKLESGKPKLTPPESSIESGSKTKHNTFWTQAQSTFDNFSQSVDSTMKWAVIESIISGVVVLIAIIAIVYAIIECLKKAGEAIPAYVQVSSKEKDDKDSNSFPSTSEFEVVVIPPNSTVQGSKAEFATMERFLSNINKEKPIRFSPEQLDVITWNYSTILGSGAFGVVYKGELSNGEHVAVKVINSLDMGMEEQFKAEVGTIGRTYHSGFMASASTMRSELLSTSVWKMGLSTLTCLEARTEALSLRSFIRLQLEQQKELLIYMRNVNKE	733

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr13530g00002	733	SUPERFAMILY	Protein kinase-like (PK-like)	165	451	IPR011009	-
	Mupr13530g00002	733	FunFam	Putative receptor-like protein kinase	256	458	-	-
	Mupr13530g00002	733	ProSitePatterns	Protein kinases ATP-binding region signature.	186	208	IPR017441	GO:0005524
	Mupr13530g00002	733	Gene3D	Transferase(Phosphotransferase) domain 1	256	457	-	-
	Mupr13530g00002	733	Gene3D	Phosphorylase Kinase; domain 1	589	675	-	-
	Mupr13530g00002	733	Gene3D	Phosphorylase Kinase; domain 1	147	255	-	-
	Mupr13530g00002	733	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5	496	670	-	-
	Mupr13530g00002	733	MobiDBLite	consensus disorder prediction	466	485	-	-
	Mupr13530g00002	733	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	300	312	IPR008271	GO:0004672\|GO:0006468
	Mupr13530g00002	733	SMART	serkin_6	180	450	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr13530g00002	733	ProSiteProfiles	Protein kinase domain profile.	180	461	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr13530g00002	733	ProSitePatterns	Protein kinases ATP-binding region signature.	623	645	IPR017441	GO:0005524
	Mupr13530g00002	733	SUPERFAMILY	Protein kinase-like (PK-like)	602	670	IPR011009	-
	Mupr13530g00002	733	ProSiteProfiles	Protein kinase domain profile.	617	733	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr13530g00002	733	FunFam	serine/threonine-protein kinase PBS1-like	149	255	-	-
	Mupr13530g00002	733	Pfam	Protein kinase domain	183	448	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr13530g00002	Mupr-Chr13530	7384	15317	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr13530g00002	606	670	Receptor kinase-like Gene Family	AT1G66980	43.077	9.83e-08	53.9

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-Os	Mupr13530g00002		Pkinase	1.5e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr13530g00002	-		-	aprc:113852543	704.516