Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13519g00004 ATGCTGCCTCACAAGCACACTCTGGTGGTTGTGGCCGCCACACTGGCGCTGCTGCTGGTTGTGGCAGCGGAAGCAGATCTGGCATCGGAGCGAGCCGCATTGCTCGCTCTCCGCTCAGCCGTGGGCGGTAGAACGCTCTTCTGGAACGCAACGAGGGAGAGTCCCTGCAACTGGGCGGGGGTCCAATGCGAGCACGAGCATGTGGTTGAGTTGCACCTCCCCGGCGTGGCCCTCTCCGGCGAAATCCCTTTGGGGATATTTGGGAACCTGACGCAGCTACGAACCCTGAGTCTCCGTTTCAACGCGCTGAGGGGTCCCCTCCCTTCAGATCTGGGATCCTGCGTGAACCTGCGCAATCTGTACCTACAGCGGAACTTACTAAGTGGGGAAATCCCAGCGTTTCTGTTTCAGTTAACGGACCTGGTTCGCCTGAACATGGGCTTCAACAACTTCTCTGGCCCATTTTCGAGCGCCTTCAACAACCTAACCAGGTTGAAAACTTTGTTTCTGGAAAACAACCAGCTCTCGGGCCCAATTCCCGAGTTCAACAAACTTGCCCTCGACCAGTTCAACGTCTCCAACAACCTCCTCAATGGTTCTGTCCCTCTCAAGCTTCAGACATTTACTCAGGATTCCTTTCTTGGTAACTCCCTCTGTGGTCGACCACTCTCTCTCTGCCCCGGCGATGTCGCCGATCCTATCTCCGTCGACAACAACGCCAAGGGCACCAACACTAACAACAAAAAGAAGTTGTCTGGCGGCGCCATTGCGGGAATTGTTGTCGGATCGGTGGTGTGTCTTCTGTTGGTGGTGTTCCTCTTCATTTTCCTCTGCAGGAACAAGAGTGGGAAGAAGACCAGCGCGGTTGACATTGCTACTGTCAAACATCCTGAGGCCGAGTCCGAGGTTCTTGCTGGGAAGGCCGTCTCCGATGTCGAGAACGGTGCTCACGGCAATGGGAATGCTGCTACGGTGGCTGTGGCTGCGGTGGCTGTGGCGGCGGGTAATGGTGCTAGCAAGGCGGAGGGGAACGGTGCTGTGGGAGCGAAGAAGTTGGTGTTTTTCGGAAATACGGCGAGGGCGTTTGATTTGGAGGATTTGCTTAGAGCTTCGGCGGAGGTATTGGGGAAGGGGACATTTGGGACGGCGTATAAGGCGGTTCTGGAGGCGGGGCCTGTGGTGGCTGTGAAGAGGTTGAAGGATGTGACTATTTCGGAGAAGGAGTTTAAGGAGAAGATTGAGGGTGTGGGAGCGATGGATCATGAGAGTTTGGTGCCTCTCAGGGCTTACTATTTCAGCAGGGATGAGAAGCTCCTTGTCTATGATTACATGCCCATGGGAAGCTTGTCTGCACTTTTGCATGGAAACAAAGGGGCGGGTAGGACGCCACTGAATTGGGAAGTGAGATCAGGCATTGCACTTGGAGCTGCCCGTGGCATTGAGTACCTACATTCACGAGGGCCTAATGTTTCTCATGGAAATATAAAGTCATCTAACATCCTCTTAACCAAATCATACGATGCCAGAGTGTCTGACTTTGGCCTTGCACACCTTGTTGGCCCCTCCTCTACCCCCAACCGTGTAGCCGGCTACCGTGCGCCTGAGGTAACCGATCCTCGCAAGGTATCTCAGAAGGCAGATGTGTACAGCTTTGGTGTATTGCTCTTGGAACTTCTGACTGGGAAGGCACCTACCCATGCTCTCCTGAATGAGGAAGGAGTAGACCTCCCCAGATGGGTTCAATCAGTGGTTAGAGAAGAGTGGACTTCTGAGGTCTTTGATCTTGAGCTCCTTAGGTATCAGAATGTGGAAGAGGAAATGGTTCAGTTGTTGCAACTTGCAGTTGATTGTGCAGCACAATACCCTGACAAGCGCCCTTCAATGTCTGAAGTGGTAAGGAGCATAGAAGAGTTGCGAAGGTCTAGCTTGAAAGAGGACCAAGACCAAATCCAACATGATCCCATCAATGATATAGAGTTATAG 1983 0.532 MLPHKHTLVVVAATLALLLVVAAEADLASERAALLALRSAVGGRTLFWNATRESPCNWAGVQCEHEHVVELHLPGVALSGEIPLGIFGNLTQLRTLSLRFNALRGPLPSDLGSCVNLRNLYLQRNLLSGEIPAFLFQLTDLVRLNMGFNNFSGPFSSAFNNLTRLKTLFLENNQLSGPIPEFNKLALDQFNVSNNLLNGSVPLKLQTFTQDSFLGNSLCGRPLSLCPGDVADPISVDNNAKGTNTNNKKKLSGGAIAGIVVGSVVCLLLVVFLFIFLCRNKSGKKTSAVDIATVKHPEAESEVLAGKAVSDVENGAHGNGNAATVAVAAVAVAAGNGASKAEGNGAVGAKKLVFFGNTARAFDLEDLLRASAEVLGKGTFGTAYKAVLEAGPVVAVKRLKDVTISEKEFKEKIEGVGAMDHESLVPLRAYYFSRDEKLLVYDYMPMGSLSALLHGNKGAGRTPLNWEVRSGIALGAARGIEYLHSRGPNVSHGNIKSSNILLTKSYDARVSDFGLAHLVGPSSTPNRVAGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSVVREEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCAAQYPDKRPSMSEVVRSIEELRRSSLKEDQDQIQHDPINDIEL 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13519g00004 660 Gene3D Transferase(Phosphotransferase) domain 1 444 658 - -
Mupr13519g00004 660 FunFam pollen receptor-like kinase 1 338 443 - -
Mupr13519g00004 660 PANTHER OS05G0588300 PROTEIN 10 642 - -
Mupr13519g00004 660 Gene3D Ribonuclease Inhibitor 27 189 IPR032675 -
Mupr13519g00004 660 Gene3D Phosphorylase Kinase; domain 1 337 443 - -
Mupr13519g00004 660 FunFam Probable inactive receptor kinase At1g48480 444 647 - -
Mupr13519g00004 660 ProSitePatterns Protein kinases ATP-binding region signature. 375 397 IPR017441 GO:0005524
Mupr13519g00004 660 Pfam Protein kinase domain 372 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr13519g00004 660 SUPERFAMILY Protein kinase-like (PK-like) 373 636 IPR011009 -
Mupr13519g00004 660 ProSiteProfiles Protein kinase domain profile. 369 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr13519g00004 660 SUPERFAMILY L domain-like 48 206 - -
Mupr13519g00004 660 Pfam Leucine rich repeat N-terminal domain 28 63 IPR013210 -
Mupr13519g00004 660 CDD STKc_IRAK 375 638 - -
Mupr13519g00004 660 FunFam Probable inactive receptor kinase RLK902 27 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13519g00004 Mupr-Chr13519 22396 25138 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13519g00004 26 639 Receptor kinase-like Gene Family AT1G48480 65.865 0.0 800
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mupr13519g00004 Pkinase 8.4e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13519g00004 - - gmx:100818955 1067.37