Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1350g00007 ATGTTCGATGGAGCAGCAGACCAGTTCCACCAATTCATAGCACCAAGGACCACTCTTCCTCTCCACTTGTCTAATTTCCCTCTCCATCCCTCTCCCACCCCAAATACCTTCCTACCCTTTGATCCCTATAACCCTTTGCCACTCCAAACCAATCTCTTGCACTCATTGCACCCCCCTTCTCCCACCCACAAACACAACAAGGAACCAAATACCATCCTTGCCCCAATCCTCCAGATTCAAAGACAGTTACCAGACCTTACCGATTCCTGGACCAACGATGAAGTGCTTGCACTTTTCAGAATCAGATCTAGCATGGAAAATTGGTTCCCACAACTCACATGGGAGCATGTCTCAAGGAAGCTAGCAGAGCTTGGGTTTAAGAAGAGTGCAGAGAAGTGCAAGGAGAAGTTCGAAGACGAGAGCAGATATTTCGACAACATTAACTACGGCAAGAACAATTACCGGTTCCTCAGCGAGCTCGAGGAGCTTTGTCAAAACCCCGATCCGGGTGGTGGTGCTGGTGATGAAACTGATAAGACCCAACACCACCACGCGTTGGAGGAAAATTCCAGAGCCACCGAAGCGTGTGACAAGGTAGTAGTGGAAAAGTCAAAGGAGCGGAAGAGGAAGCGGCGCGATAGGTTCGAAATGTTCAAGGGTTTCTGCGAGAGTGTTGTGAACAAGATGATGGCTCAGCAGGAAGAGATACACTGCAAGCTCCTGGAGGACATGGTGAAGAGGGACCAAGAGAAGTTCGCCAGAGAGGAAGCGTGGAAGAAGCAAGAGATGGAAAGGATGAACAAGGAGCTCCAAATCATGGCACAAGAGCAAGCTATTGCGGGGGATAGACACGCCACCATCATTGAATTTTTGAAGAAATATGCAACATTATCCCCTGCATGCCAAAATGTTCCAAATTCTCCACGCACTGCAATGTTGCACCCGCAAAACCCTAATAATCCTTCCATTCAAAACACCAATCTCGATCCTGAAATGATTCCGAATCATTTTGATCAAACTACGTTGGGGGCAGAAAACCCTAGCACAAGTGACACATTATTACAAGTTCCTTCTTCCTCGAATTCTTCCCCGGCTCCTCACAACCCTAGTTCTTCTTCTCTGAATAGCCATAATAGTAATATTATCCCATTAGAGTCAAATTCAGTTTCGACATACAAGAGCACCTCAACAACCCCAACCCCAATGGTGAGCAGTGAGAACTCGAAAGAGGATGTTGGGAGAAGATGGCCAAGAGATGAAGTGTTAGCACTGATAAACCTGAGGTGCACGAGTGTAAGTAACAACAACAACAACAATGAAGAGAAGGAGGGAAACAGTAAGGGTCCACTGTGGGAGAGAATATCGCAAGGGATGACAGAGCTGGGATACAAGAGAAGTGCCAAGAGGTGCAAAGAGAAGTGGGAGAACATAAACAAGTACTTCAGAAAAACCAAGGATGTTAACAAGAAAAGGTCCCTTAACTCTAGGACCTGTCCCTATTTCCATCAACTGAGCTGTTTGTATGGTCAGGGAAAAATTGTGCCACACTCTCAAAGGGAAGGGAATCCAACCTCGAATTCCGGCCAAGTGCCACCGGATCAGCCTCAACCCGATGAATCTTCTCAAGTGGGCTCTTCTGCTTTGGTTCAGTATGCATGT 1659 0.4696 MFDGAADQFHQFIAPRTTLPLHLSNFPLHPSPTPNTFLPFDPYNPLPLQTNLLHSLHPPSPTHKHNKEPNTILAPILQIQRQLPDLTDSWTNDEVLALFRIRSSMENWFPQLTWEHVSRKLAELGFKKSAEKCKEKFEDESRYFDNINYGKNNYRFLSELEELCQNPDPGGGAGDETDKTQHHHALEENSRATEACDKVVVEKSKERKRKRRDRFEMFKGFCESVVNKMMAQQEEIHCKLLEDMVKRDQEKFAREEAWKKQEMERMNKELQIMAQEQAIAGDRHATIIEFLKKYATLSPACQNVPNSPRTAMLHPQNPNNPSIQNTNLDPEMIPNHFDQTTLGAENPSTSDTLLQVPSSSNSSPAPHNPSSSSLNSHNSNIIPLESNSVSTYKSTSTTPTPMVSSENSKEDVGRRWPRDEVLALINLRCTSVSNNNNNNEEKEGNSKGPLWERISQGMTELGYKRSAKRCKEKWENINKYFRKTKDVNKKRSLNSRTCPYFHQLSCLYGQGKIVPHSQREGNPTSNSGQVPPDQPQPDESSQVGSSALVQYAC 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1350g00007 553 FunFam Trihelix transcription factor GT-2 90 146 - -
Mupr1350g00007 553 MobiDBLite consensus disorder prediction 307 407 - -
Mupr1350g00007 553 CDD GT1 90 144 - -
Mupr1350g00007 553 ProSiteProfiles Myb-like domain profile. 415 478 IPR001005 -
Mupr1350g00007 553 Gene3D - 90 146 - -
Mupr1350g00007 553 Gene3D - 416 483 - -
Mupr1350g00007 553 MobiDBLite consensus disorder prediction 514 546 - -
Mupr1350g00007 553 MobiDBLite consensus disorder prediction 517 546 - -
Mupr1350g00007 553 MobiDBLite consensus disorder prediction 307 414 - -
Mupr1350g00007 553 CDD GT1 414 485 - -
Mupr1350g00007 553 FunFam Trihelix transcription factor GTL2 416 483 - -
Mupr1350g00007 553 PANTHER FI21293P1 85 543 - -
Mupr1350g00007 553 Pfam Myb/SANT-like DNA-binding domain 414 504 IPR044822 -
Mupr1350g00007 553 Pfam Myb/SANT-like DNA-binding domain 88 151 IPR044822 -
Mupr1350g00007 553 MobiDBLite consensus disorder prediction 175 189 - -
Mupr1350g00007 553 MobiDBLite consensus disorder prediction 166 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1350g00007 Mupr-Chr1350 55875 58047 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1350g00007 215 510 Trihelix Transcription Factor Family AT5G28300 49.834 7.90e-79 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mupr1350g00007 Myb_DNA-bind_4 1.5e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1350g00007 - - gmx:100801868 744.191