Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13503g00005 ATGGGAAGGTACCGAAGCCGGAGCAGAAGTTATAGCCCTCGGCGGCGAAGCAGGTCCCCACCAGCGCCGCGCGGACGCAAGCGGTATGTCGACGATCGCTACGGTGACAGCAGGTCGTACAGAGACCGCCGCTCACCTCTTCCTTCCGGCTTGCTTGTTCGCAATCTCCCCCTCGATGCTAGGCCCGAGGATCTTAGGATCCCATTTGAGCGTTATGGTCCTGTGAAGGATGTTTATCTTCCCAAAAATTACTATACTGGTGAGCCTCGGGGCTTTGGATTTGTGAAATATCGATATGGTGAAGATGCAGCTGAGGCAAAGCAACATCTTAATCATACTATCATTGGTGGACGTGAAATAAGAATTGTTTTTGCCGAGGAAAATAGGAAAACTCCTCAAGAAATGCGTATTAATTCTCGAGGAAGTGGTCGATCTGGAAGTGGTAGAAGGAGGAATCGTACTAAATCCCCACGACGCCGATATCGTTCCTACTCTCGGTCTCCATCACCAGCCAGGGATGATTCAAGGGATGACAGGGGTAGGGATGATTATTATTCTCCTGAGCGATCAAGATCTTTTTCTAGGTCTGTCTCTCCTAGTGGTGGGAGGGACTACAGGAAGTCCCCTCGTCTCAGGGAGAATGGTCGGAGTCCGACTGACAAGAAGGATCAGACACCTAGCAGATCTGAGAGTCCTAGGGGTAATGATCGCAGTCCTTCAATGTCTCGTTCACGTTCATAC 741 0.5047 MGRYRSRSRSYSPRRRSRSPPAPRGRKRYVDDRYGDSRSYRDRRSPLPSGLLVRNLPLDARPEDLRIPFERYGPVKDVYLPKNYYTGEPRGFGFVKYRYGEDAAEAKQHLNHTIIGGREIRIVFAEENRKTPQEMRINSRGSGRSGSGRRRNRTKSPRRRYRSYSRSPSPARDDSRDDRGRDDYYSPERSRSFSRSVSPSGGRDYRKSPRLRENGRSPTDKKDQTPSRSESPRGNDRSPSMSRSRSY 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13503g00005 247 MobiDBLite consensus disorder prediction 1 47 - -
Mupr13503g00005 247 MobiDBLite consensus disorder prediction 146 162 - -
Mupr13503g00005 247 SMART rrm1_1 50 123 IPR000504 GO:0003723
Mupr13503g00005 247 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 50 236 - -
Mupr13503g00005 247 Gene3D - 26 166 IPR012677 -
Mupr13503g00005 247 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 49 127 IPR000504 GO:0003723
Mupr13503g00005 247 MobiDBLite consensus disorder prediction 126 247 - -
Mupr13503g00005 247 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 51 121 IPR000504 GO:0003723
Mupr13503g00005 247 MobiDBLite consensus disorder prediction 231 247 - -
Mupr13503g00005 247 MobiDBLite consensus disorder prediction 1 23 - -
Mupr13503g00005 247 FunFam Serine/arginine-rich SC35-like splicing factor SCL28 2 141 - -
Mupr13503g00005 247 MobiDBLite consensus disorder prediction 24 43 - -
Mupr13503g00005 247 SUPERFAMILY RNA-binding domain, RBD 51 154 IPR035979 GO:0003676
Mupr13503g00005 247 MobiDBLite consensus disorder prediction 166 189 - -
Mupr13503g00005 247 MobiDBLite consensus disorder prediction 205 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13503g00005 Mupr-Chr13503 31238 36198 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13503g00005 53 111 Eukaryotic Initiation Factors Gene Family AT3G11400 44.068 2.17e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13503g00005 K12900 - gmx:100788749 341.658