Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13498g00002 ATGAAGCAAACAAGAAGTTCGGATGTAACTGGGATTGATTCCAGCATAATAAGATTTCATTTACACCAATCATTCACTCATCCAGGAAACTTCTCTAAAAACAGCACCATGTCAACCTCTAGAACCTCAGATACACATACACCCTTCAAAGGATATGATCCTAACCAAACTCAAATGTGTCTCTCTCTCCTCCAACGCAACACATCTCCTTGTGGTGAGAGAAGAGGCAGAAGGAAGCAGGCAGAACCAGGGAGATTCCTTGGGGTTAGGAGGCGCCCTTGGGGCCGTTATGCTGCTGAAATTAGAGACCCCACAACCAAAGAGAGGCATTGGCTTGGCACATTTGACACTGCTCAAGAAGCAGCTCTTGCTTATGACAGAGCTGCTCTGTCCATGAAAGGAAGCCAAGCAAGGACCAACTTTGTTTACTCTGACAACATCAACTTCCACACTCTCCTTTCTCCTGTTGATCTTCAACTTCAACTTCAACCTCTCTTGCCAACTTCACACTTCCTCACTAACAGTAACAGTAACACTAACACCAAACAACCAACCACCCACAATAGCCTCTCTCAATCTCAGGTTATTCACACTTCAAACTGTGGAAATGGAAGCCCCTCCCCATTGAACAATGACATGTGTGTCGAAAAAACCACATATGGGTCAGCTCAGGATGATAGTTTCTTCTTTTCCAATGATTCTAACTCTGGCTATCTGGAATGCATAGTTCCTGATAATTGCTTCAGACCTGCTTCCTCCACAAAGAGCAATGTGAGTGATCAAAAGGCTAATAACACAAGCTTCATAGAGAGTACTCATCATAATCATCAGTACTCACATGTTGACATGACTTTGACTTCATTCTCTCAAGAAGGCATAGAAATGGCATCAAGGGACTCTAACTTGTCAGATTTTTGTTATCCAAGTCAAGGATCATGGGATTGGAATTCTAGTGAACTTTCAGCTATATTTAAGAACCCATTAAGTGTTGAAGATGGGTGCATTGATGCATTGTACCCCATCAGTGATAGTCCAAGTCCAAGCTATGGGCTAATGAATCAGGCTGCTTCTTCTTCAACTACCTGTTCTCCATCACTTCCACCCTTTGGGGACGTAGACTTGGGATACCCACTCTTCTGA 1140 0.4333 MKQTRSSDVTGIDSSIIRFHLHQSFTHPGNFSKNSTMSTSRTSDTHTPFKGYDPNQTQMCLSLLQRNTSPCGERRGRRKQAEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAQEAALAYDRAALSMKGSQARTNFVYSDNINFHTLLSPVDLQLQLQPLLPTSHFLTNSNSNTNTKQPTTHNSLSQSQVIHTSNCGNGSPSPLNNDMCVEKTTYGSAQDDSFFFSNDSNSGYLECIVPDNCFRPASSTKSNVSDQKANNTSFIESTHHNHQYSHVDMTLTSFSQEGIEMASRDSNLSDFCYPSQGSWDWNSSELSAIFKNPLSVEDGCIDALYPISDSPSPSYGLMNQAASSSTTCSPSLPPFGDVDLGYPLF 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13498g00002 379 Gene3D AP2/ERF domain 85 143 IPR036955 GO:0003700|GO:0006355
Mupr13498g00002 379 CDD AP2 85 141 IPR001471 GO:0003700|GO:0006355
Mupr13498g00002 379 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 60 256 - -
Mupr13498g00002 379 ProSiteProfiles AP2/ERF domain profile. 85 142 IPR001471 GO:0003700|GO:0006355
Mupr13498g00002 379 SUPERFAMILY DNA-binding domain 86 143 IPR016177 GO:0003677
Mupr13498g00002 379 MobiDBLite consensus disorder prediction 27 52 - -
Mupr13498g00002 379 FunFam Ethylene-responsive transcription factor 2 85 143 - -
Mupr13498g00002 379 Pfam AP2 domain 88 134 IPR001471 GO:0003700|GO:0006355
Mupr13498g00002 379 PRINTS Ethylene responsive element binding protein signature 86 97 IPR001471 GO:0003700|GO:0006355
Mupr13498g00002 379 PRINTS Ethylene responsive element binding protein signature 108 124 IPR001471 GO:0003700|GO:0006355
Mupr13498g00002 379 SMART rav1_2 85 148 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13498g00002 Mupr-Chr13498 15692 17859 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13498g00002 37 250 AP2-EREBP Transcription Factor Family AT5G18560 46.215 4.07e-57 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mupr13498g00002 AP2 1.8e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13498g00002 - - gmx:100812047 517.309