Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13485g00005 ATGTTAGCCCAATTGGAGGCATTTGTTCGGCCTAAACAAGAGGACCTTGGGAATCGTGTTTTAGAGGATTTTGACATAAAAAAGGAAGCTGGGGGCTTCTCTTTCAGATCTGTCAAAAAGCAATTTAGGTTTGAAGTGTCAAAAAACTATTTTGAGATCCCTCTCTTTTGGGCTGGAAAAGGGACTTGCTGCATACCAACTCAAGGTACTTATGGGCCCCTGATTCAAGCCATCGAAGTTATCCCAGATTTCTCACCTAATGCCAGTAACGAATCTCCAAGCACTAAAAAAAGTAGAACCAGTCTAATCATTGGAATTTTCATTGGAGTTGTAAGCTTTTTGTTAATTTTGATTTTCTGTATCATCCAGAGCAGAAAACCCCATGATGGTGATGAAGGTAAAGAAGTTTGTGTAAATATTCGTATAGGGACACTTAATGATGGAGGAGTAATTGCTGTGAAACAACTGTCTGTAGGATCCCATCAAGGAAAAAGCCAGTTCATAACTGAGATTGCTACCATATCAGCTGTGCAACATCGTAATCTGGTCAAATTATATGGATTAGTATTCAAGGGAGTAAAAGACTTCTTGTCTACGAGAAATCATTTCACCCTTAGTTGGTCCACACGCTATGATATTTGTTTAGCTATTGCTAGAGGTTTAACTTATTTACATGAAGAATCACGTCTCCGTATTGTACACCTTAGTAATATTTTGCTTGATCATGAGCTTATGCCAAAAATATCTGATTTTGGGTTCGCCAAATTGTATGATGATAAAATGACCCATATGAGCACCCGTGTGGCTGGGACAATTGGATATCTTGCGCCAGAGTATGCCATGCGTGGATACCTTACGGAGAAAGCAGATGTATTTTCGATTGGTGTTGTATCTCTGGAGTTAGTTAGTGGGAGGCCAAATTCTTATTCAAGTTTGGAAGGAGAGAAGGTGTATCTTCTTGAATGGGCGTGGCAGCTTCATGAAAGCAACCGCATAACTGATCTTGTGGATCCTAGACTTTCAAAATTTAACGAGGAAGAAGTAAAACGCATTGTAGGAATTGTGCTTTTGTGCACTCAAGCATCACCAGCATTACGACCCTCAATGTCCCGAGATATTAAAGTGAGCAATGTAACTACAAAGCCTGGATACCTGACTGACTGGAATTTTGAGGATGTGACCAGCTTCATGACTGACACTATAATCAAAGGATCATATACATGTTATGAGAATTCACCAGCAAGTACAAGCATAGTGGCTAATGCCTACCACTCACCAATAAGTGTTTCTAAACCAATTCTTCGTAAGACTATTGTACCGGTCGACCCTCGTTACATCTCTGTCGGTTTGCGTTTCGGCCTGTCCTTGCTACCCCTCGGCCGATCCTAA 1389 0.4068 MLAQLEAFVRPKQEDLGNRVLEDFDIKKEAGGFSFRSVKKQFRFEVSKNYFEIPLFWAGKGTCCIPTQGTYGPLIQAIEVIPDFSPNASNESPSTKKSRTSLIIGIFIGVVSFLLILIFCIIQSRKPHDGDEGKEVCVNIRIGTLNDGGVIAVKQLSVGSHQGKSQFITEIATISAVQHRNLVKLYGLVFKGVKDFLSTRNHFTLSWSTRYDICLAIARGLTYLHEESRLRIVHLSNILLDHELMPKISDFGFAKLYDDKMTHMSTRVAGTIGYLAPEYAMRGYLTEKADVFSIGVVSLELVSGRPNSYSSLEGEKVYLLEWAWQLHESNRITDLVDPRLSKFNEEEVKRIVGIVLLCTQASPALRPSMSRDIKVSNVTTKPGYLTDWNFEDVTSFMTDTIIKGSYTCYENSPASTSIVANAYHSPISVSKPILRKTIVPVDPRYISVGLRFGLSLLPLGRS 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13485g00005 462 Gene3D - 16 83 - -
Mupr13485g00005 462 Pfam Malectin domain 17 78 IPR021720 -
Mupr13485g00005 462 Gene3D Transferase(Phosphotransferase) domain 1 195 382 - -
Mupr13485g00005 462 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 17 392 - -
Mupr13485g00005 462 SUPERFAMILY Protein kinase-like (PK-like) 145 374 IPR011009 -
Mupr13485g00005 462 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 190 382 - -
Mupr13485g00005 462 ProSiteProfiles Protein kinase domain profile. 121 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr13485g00005 462 Pfam Protein tyrosine and serine/threonine kinase 150 370 IPR001245 GO:0004672|GO:0006468
Mupr13485g00005 462 SMART serkin_6 130 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr13485g00005 462 Gene3D Phosphorylase Kinase; domain 1 124 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13485g00005 Mupr-Chr13485 5626 9513 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13485g00005 17 434 Receptor kinase-like Gene Family AT1G56120 50.000 5.60e-149 444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr13485g00005 PK_Tyr_Ser-Thr 1.6e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13485g00005 - - gmx:100798233 567.385