Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1347g00003 ATGGCATTGGGCAGGTTTTTTTTCCTTGTGGTGTTCCCTATTCTGTGTGTGGGAACAAGGGCATTACCTCATCATACGGTAAATGATGTATTTGTGAGTTTTAGTGGCAAAGATATCCGCCGAGATTTCCTTAGTCACTTGATTAGGGACTTTTCTCGAAAGCAAATTTTTGCTTTTGTTGATTACAAACTCGAGAGAGGGGACCAAATATCGGCGGCACTTTCCAGTGCAATTGAAAGGTCGGGGATTTCACTCGTTATTTTCTCTCTCAACTACGCCGATTCGGGTTGGTGTTTAGACGAGCTTGTGAATATATCGGAGTGTAGAAAGTGGCAGGGACAGCTTGTGATACCTGTCTTCTATAATGTTGATCCTTCGCACGTGCGCCACCAAGAGGGGACCTATGTAAGGGAAGAGTCAGAAAGGCATGGAATAATTTCTTTAAAGGAAAAACTTTTCTCTACATTATTAGAAGAAGATTTGAAATTTAACACAGCAAATGGTTTACCTGGTTATGTTAAGAGTAGACTTAGTTATATGAAAGTTCTTATTGTTCTCGATGATGTGAATGATTCAGATCAACAAGAAATTTTAGTTGGAACTGGTGATTGGTTTGGATCAGGTAGTAGAATAATTGTAACAAGCAGAAATAAGCAAGTGCTTGCTAATGGGGTTGATGATATATATAAGGTTGGGGTATTGGACTTTGATGATGCACTTAAGCTTTTCAACATGCATGCCTTTAAACAAAATCATCTTGAGATGTTGGATTACTACGACCTAGCAATTAGGGTGGTCAATTATGCAAATGGAATTCCATTAGTACTTAAAGTTTTGGGTCATCTACTTCGAGGAAAAGATAAGGAGTTATGGGAGAGTCAACTGTACAAGCTTAGAAAGTTGCCTAGTAAAAAAATTCATGATGTGATGAAATTGAGTTATGATGATTTGGACCGCAATGAGCAAAGAATATTTTTAGACCTTGCCTGTTTCTTCAGTGGCTTGATTTTGGAAGTGGGCTACGTAAAAGTCTTGTTGAAAAATAGCAAAAACGATAATTCTGTGGCTATTGGGTTAGAGGGGTTAAAAGATAAATCTCTCATCAGTGTGTCTGAAGATAATGTAGTGTATATGCACGATATTATAGAAGAAATGGGTTGGGAGATTGTTCGTCAAGAATGTAGTGAAAACCCTGGAGGCTGTAGTCGATTATGGGATCCAGATGACATCTGTGAAGTATTGAAAAATGACGAGGGGACTGAGGCCATTAGAAGCATAAGGACACACTTGTCAGCAGTTACGAGGCTGAAGCTAAGCCCTCACGTGTTTGTTAAAATGACCAAATTGCAATTCATGGATTTTCACAGTGAAAGTGATCAAGATGGCTTGGATATTCTTCCTGAAGGGCTTCAGTATTTGCCAACTGAACTGAGATACCTTCGTTGGATGAATTACCCTCTGAAGTCCTTACCAGAGAGGTTTTCTCCTGAAAACCTTGTTATCTTGGACCTGTCATATAGCCGACTGGAAACACTTTGGCATGGACAACAGAATTTGGTAAATTTAAAACTAGTTAGATTTTATGGCTCCAAGTTTCTCAAGGAATTGCCAGATTTTTCGAAAGCCACCAATCTGGAACTGCTGGACATCCGTTTCTGCACTAATTTAGCCAGTGTTCATGCATCCATTTTGACTATCAACAACCTTGAGAAATTGGATGATACTGCGCGATAA 1734 0.3922 MALGRFFFLVVFPILCVGTRALPHHTVNDVFVSFSGKDIRRDFLSHLIRDFSRKQIFAFVDYKLERGDQISAALSSAIERSGISLVIFSLNYADSGWCLDELVNISECRKWQGQLVIPVFYNVDPSHVRHQEGTYVREESERHGIISLKEKLFSTLLEEDLKFNTANGLPGYVKSRLSYMKVLIVLDDVNDSDQQEILVGTGDWFGSGSRIIVTSRNKQVLANGVDDIYKVGVLDFDDALKLFNMHAFKQNHLEMLDYYDLAIRVVNYANGIPLVLKVLGHLLRGKDKELWESQLYKLRKLPSKKIHDVMKLSYDDLDRNEQRIFLDLACFFSGLILEVGYVKVLLKNSKNDNSVAIGLEGLKDKSLISVSEDNVVYMHDIIEEMGWEIVRQECSENPGGCSRLWDPDDICEVLKNDEGTEAIRSIRTHLSAVTRLKLSPHVFVKMTKLQFMDFHSESDQDGLDILPEGLQYLPTELRYLRWMNYPLKSLPERFSPENLVILDLSYSRLETLWHGQQNLVNLKLVRFYGSKFLKELPDFSKATNLELLDIRFCTNLASVHASILTINNLEKLDDTAR 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1347g00003 577 SUPERFAMILY L domain-like 378 573 - -
Mupr1347g00003 577 Gene3D - 27 160 IPR035897 -
Mupr1347g00003 577 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 135 328 IPR027417 -
Mupr1347g00003 577 SMART till_3 27 162 IPR000157 GO:0007165
Mupr1347g00003 577 Pfam NB-ARC domain 157 308 IPR002182 GO:0043531
Mupr1347g00003 577 Pfam TIR domain 29 138 IPR000157 GO:0007165
Mupr1347g00003 577 SUPERFAMILY Toll/Interleukin receptor TIR domain 22 135 IPR035897 -
Mupr1347g00003 577 Gene3D - 234 318 IPR042197 -
Mupr1347g00003 577 ProSiteProfiles TIR domain profile. 26 156 IPR000157 GO:0007165
Mupr1347g00003 577 Gene3D Ribonuclease Inhibitor 419 574 IPR032675 -
Mupr1347g00003 577 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 136 573 IPR044974 GO:0006952
Mupr1347g00003 577 PRINTS Disease resistance protein signature 176 190 - -
Mupr1347g00003 577 PRINTS Disease resistance protein signature 540 556 - -
Mupr1347g00003 577 PRINTS Disease resistance protein signature 269 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1347g00003 Mupr-Chr1347 17231 20382 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1347g00003 136 553 WRKY Transcription Factor Family AT4G12020 36.131 1.35e-64 228