Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13479g00001 ATGGCCAAGAGTCACCGTCTCTTTCACTTTTTCCAGTTCTTGGCAATGCTGTTACTCACTACCTACTCGCCTTGTGTGTCTCTAACGTTGGAAACCCAAGCTCTTGTTCAGTTCAAGAACCATTTGAACGACTCCTTGAATTCTTTGGCTTCATGGAATGAATCAAACTCTCCATGTGAGTTTTATGGAATTACATGTGATCCAGTATCTGGGAGAGTCACAGAAATGTCACTGGACAATAAGTCCCTCTCTGGTGACATTTTCCCGTCACTCTCAGTTCTGCAGAGCCTGCAAGTTCTGTCACTCCCATCCAATTTAATTTCTGGAAATCTTCCATCAGAAATAAGCAGGTGTACCAACCTGAGAGTTTTGAATCTAACAGGAAATCAATTGGTTGGAGCAATCCCAGACTTGTCTGGGCTGAGAAATCTGCAGATTCTAGACCTTTCAGCAAACTACTTTTCTGGCAGCATCCCCAGGTGGGTGGGGAATCTAACAGGACTGGTTGCACTGGGTCTTGGGGAGAATAAATACAATGAGGGTGAGATTCCAGACACTCTTGGAAATCTCAAGAACTTGACATGGCTCTATCTTGGTGGCTCCCATTTGATAGGAGAAATTCCAGAATCACTGTATGAAATGAAGGCATTGGAGACACTGGATATTTCAAGAAACAAGATATCTGGCAGACTCTCCAGATCAATTTCCAAGTTAGAGAATCTTTACAAGATTGAGCTCTATTCAAATAATTTGACAGGAGAGGTTCCGGCCGAGCTTGCAAGCCTTACCAATCTGCATGAGATTGACCTTTCTGTAAACAATATGTATGGTAGCTTGCCAGAGGAAATTGGTAATATGAACAACTTGCTTGTTTTTCAATTATATGAAAACAGCTTTTCTGGAGAACTTCCTGCTGGATTTGCTGATATGCGCCATCTCATTGGGTTCTCAATTTATAGAAACAACTTCACTGGGACGATTCCAGAAAATTTTGGCCGGTTTTCACCGCTAGAAAGTATTGACATATCTGAGAATCAATTTTCAGGTGATTTCCCAAAGTTCTTGTGTGAAAGCAGGAAGTTGAGATTTTTGCTTGCATTGCAAAACAATTTCTCTGGGACTTTTCCGGAGTCTTATGTTACATGCAAATCTCTGGAGAGATTTAGGATCAGTATGAACCGCTTGTCTGGGAAAATTCCAGATGAGGTTTGGGCACTTCCATATGTAAAAATAATTGATTTGGCCTATAATGATTTCATTGGTGTGGTACCTTCAGAAATTGGGTTGTCTACTAGCTTAAGTCAGTTAGTTTTGACAAAGAACAGGTTTTCGGGTAAGCTCCCATCAGAGCTTGGCAAGGTGGTGAACTTGGAGAAGCTTTACTTGAGCAACAATAATTTCTCTGGTGAAATACCACCTGAAATTGGATCACTGAAGCAGTTATCCTCTTTGCATCTAGAAGAGAATTCGTTGACTGGATCAATACCCGCAGAACTGGGTCATTGTGCAAGGCTGGTAGACTTGAATCTTGCTTGGAATTCTCTATCTGGAAATATCCCCCACTCAGTTTCACTTATGACCTCATTGAACTCTCTTAACATATCTGGAAACAAACTTACAGGTTCTATTCCAGATAATTTAGAAGCAATAAAGCTAAGCTCGGTGGATTTTTCTGAAAACCTGCTTTCTGGGAGAATTCCATCTGGTCTTTTTATTGTTGGAGGAGAGAAAGCTTTTCTTGGAAACAAGGGGCTGTGTGTTGAGGGAAACCTAAAACCTTCCATGAATTCTGATTTGAAGATTTGTGCAAAAAATCATGGTCAGACAAGGGTCTCTGCTGATAAACTTGTCTTGTTCTTTTGTATTGCTTCTATTTTTGTTGTTGTTTTAGCCGGGTTGCTGCTTTTGAGTTGTAGAAACCTCAAGCATGGCGCTGATAAATACTTGCAAGGTGAAAAGGAAGCAAGTCAAAAATGGAAGCTTGCATCTTTCCACCAAGTAGATATTGATGCCGATGAAATATGTAAACTGAATGAAGATAATTTGATAGGTAGCGGTGGTACAGGAAAGGTTTATCGAGTGGAATTGAGGAAAAATAGAGCCATGGTGGCTGTCAAGCAATTAGGGAAAGTAGATGGAGTGAAGATTTTAGCTGCAGAGATGGAGATTTTGGGGAAAATTAGGCATAGAAATATACTCAAACTCTATGCTTGTTTACTTAAAGGAGGATCCAATCTTTTAGTGTTTGAGTACATGCCAAATGGTAATCTTTTTCAAGCTCTTCACAGACAGATAAAAGATGGGAAGCCAGACTTGGATTGGAACCAGAGGCATAAAATTGCTCTGGGAGCTGCCAAAGGAATTGCTTATTTACACCATGACTGTAATCCACCTATTATTCACAGGGATATAAAATCCAGTAATATTCTGCTTGATGAGGATTACGAGCCAAAAATTGCTGATTTTGGTATTGCAAGGATTGCAGAAAAATCTGATAAGCAGTTGGGTTATAGCTGTCTAGCTGGCACACTTGGTTATATTGCTCCAGAGCTTGCTTATGCCACTGACATCACTGAAAAGAGTGATGTTTATAGCTTTGGAGTGGTGCTATTAGAATTAGTGTCTGGCAGAGAACCCATTGAAGAGGATTATGGAGAGGCGAAGGATATTGTTTATTGGGTTTTGACTCATCTCAATGACCGTGAAAGTATTCTCAACATTCTTGATGAAAGAGTGGCATCTGAATCTGTTGAAGATATGATGAAAGTGTTGAAGATTGCTATCAAGTGCACCACTAAGCTTCCATCTTTGCGCCCCACCATGAGAGAAGTTGTCAAGATGCTAATTGATGCCGAACCCTGCACATTGAAATCTCCACACTGCCGACTTCAAAAAGACACAAAGACCCTTCTCTAG 2916 0.4057 MAKSHRLFHFFQFLAMLLLTTYSPCVSLTLETQALVQFKNHLNDSLNSLASWNESNSPCEFYGITCDPVSGRVTEMSLDNKSLSGDIFPSLSVLQSLQVLSLPSNLISGNLPSEISRCTNLRVLNLTGNQLVGAIPDLSGLRNLQILDLSANYFSGSIPRWVGNLTGLVALGLGENKYNEGEIPDTLGNLKNLTWLYLGGSHLIGEIPESLYEMKALETLDISRNKISGRLSRSISKLENLYKIELYSNNLTGEVPAELASLTNLHEIDLSVNNMYGSLPEEIGNMNNLLVFQLYENSFSGELPAGFADMRHLIGFSIYRNNFTGTIPENFGRFSPLESIDISENQFSGDFPKFLCESRKLRFLLALQNNFSGTFPESYVTCKSLERFRISMNRLSGKIPDEVWALPYVKIIDLAYNDFIGVVPSEIGLSTSLSQLVLTKNRFSGKLPSELGKVVNLEKLYLSNNNFSGEIPPEIGSLKQLSSLHLEENSLTGSIPAELGHCARLVDLNLAWNSLSGNIPHSVSLMTSLNSLNISGNKLTGSIPDNLEAIKLSSVDFSENLLSGRIPSGLFIVGGEKAFLGNKGLCVEGNLKPSMNSDLKICAKNHGQTRVSADKLVLFFCIASIFVVVLAGLLLLSCRNLKHGADKYLQGEKEASQKWKLASFHQVDIDADEICKLNEDNLIGSGGTGKVYRVELRKNRAMVAVKQLGKVDGVKILAAEMEILGKIRHRNILKLYACLLKGGSNLLVFEYMPNGNLFQALHRQIKDGKPDLDWNQRHKIALGAAKGIAYLHHDCNPPIIHRDIKSSNILLDEDYEPKIADFGIARIAEKSDKQLGYSCLAGTLGYIAPELAYATDITEKSDVYSFGVVLLELVSGREPIEEDYGEAKDIVYWVLTHLNDRESILNILDERVASESVEDMMKVLKIAIKCTTKLPSLRPTMREVVKMLIDAEPCTLKSPHCRLQKDTKTLL 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13479g00001 971 Gene3D Ribonuclease Inhibitor 239 310 IPR032675 -
Mupr13479g00001 971 Gene3D Ribonuclease Inhibitor 180 238 IPR032675 -
Mupr13479g00001 971 Pfam Leucine Rich Repeat 217 238 IPR001611 GO:0005515
Mupr13479g00001 971 Gene3D Ribonuclease Inhibitor 28 179 IPR032675 -
Mupr13479g00001 971 Pfam Leucine rich repeat N-terminal domain 31 67 IPR013210 -
Mupr13479g00001 971 SMART serkin_6 677 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr13479g00001 971 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 70 282 - -
Mupr13479g00001 971 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 214 949 - -
Mupr13479g00001 971 ProSiteProfiles Protein kinase domain profile. 677 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr13479g00001 971 SUPERFAMILY Protein kinase-like (PK-like) 676 948 IPR011009 -
Mupr13479g00001 971 SMART LRR_typ_2 454 477 IPR003591 -
Mupr13479g00001 971 SMART LRR_typ_2 94 118 IPR003591 -
Mupr13479g00001 971 SMART LRR_typ_2 526 550 IPR003591 -
Mupr13479g00001 971 SMART LRR_typ_2 478 502 IPR003591 -
Mupr13479g00001 971 SMART LRR_typ_2 141 165 IPR003591 -
Mupr13479g00001 971 SMART LRR_typ_2 262 286 IPR003591 -
Mupr13479g00001 971 SMART LRR_typ_2 214 238 IPR003591 -
Mupr13479g00001 971 SUPERFAMILY L domain-like 55 393 - -
Mupr13479g00001 971 Gene3D Phosphorylase Kinase; domain 1 645 751 - -
Mupr13479g00001 971 ProSitePatterns Serine/Threonine protein kinases active-site signature. 799 811 IPR008271 GO:0004672|GO:0006468
Mupr13479g00001 971 Pfam Leucine rich repeat 456 515 IPR001611 GO:0005515
Mupr13479g00001 971 SUPERFAMILY RNI-like 311 571 - -
Mupr13479g00001 971 FunFam Leucine-rich receptor-like protein kinase family protein 667 751 - -
Mupr13479g00001 971 ProSiteProfiles Leucine-rich repeat profile. 456 478 IPR001611 GO:0005515
Mupr13479g00001 971 FunFam Receptor-like protein kinase HSL1 288 595 - -
Mupr13479g00001 971 CDD STKc_IRAK 683 948 - -
Mupr13479g00001 971 Gene3D Transferase(Phosphotransferase) domain 1 752 959 - -
Mupr13479g00001 971 ProSitePatterns Protein kinases ATP-binding region signature. 683 706 IPR017441 GO:0005524
Mupr13479g00001 971 Pfam Protein kinase domain 679 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr13479g00001 971 FunFam leucine-rich repeat receptor-like protein kinase TDR 752 959 - -
Mupr13479g00001 971 Gene3D Ribonuclease Inhibitor 311 596 IPR032675 -
Mupr13479g00001 971 Pfam Leucine Rich repeat 118 131 IPR001611 GO:0005515
Mupr13479g00001 971 ProSiteProfiles Leucine-rich repeat profile. 120 142 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13479g00001 Mupr-Chr13479 1131 4499 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13479g00001 15 958 Receptor kinase-like Gene Family AT1G72180 56.918 0.0 1049
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mupr13479g00001 Pkinase 4.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13479g00001 - - gmx:100789704 1721.83