Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13477g00002 ATGCCGAATCCAAAAGTTCCTCGATCTAGATTTTCTAAGCTGTATATTAATCAAGTCCAGTACGGAAGCTCGCTACACCCGAACCTCCTCCTCGGCTTTGTTAATTTTGCTTCTGACCGGGAAATCATGGCTCAGAGCAATTGGGAAGCAGATAAGATGCTTGATGTTTATATTTATGATTATTTGGTGAAGAAAAAGTTGCATAACACCGCTAAAGCCTTCATGACAGAAGGGAAAGTTTCTCCTGATCCAGTAGCAATTGATGCTCCTGGAGGTTTTCTTTTTGAGTGGTGGTCTGTTTTCTGGGATATTTTTATTGCGAGGACAAACGAAAAACATTCCGAGACTGCTGCAGCATATTTAGAGGCACAACAGATTAAAGCGAAAGAACAACAGCAACTTCAAATGCAGCAGTTGCAATTAATTCGTCAAGCTCAACTGCAAAGAAGGGATTCTAATCATCCTCCCCTTGGAGGTCCTGTAAATGCTATCACTACGGAAGGAGTGCTTGGGCAATCTACTGCCAGTGCTTTGGCTGCAAAAATGTATGAGGAGCGGATGAAGCACTCTAACCCCATGGATACAGAGACATCCCAACCACTTTTAGATGCTAGAATGGCCCTTTTGAAATCAACAAATCATCCTGGTCAGATGGTTCAAGGAAATTCAGGAAGTGTGACAGCAGCTTTGCAGCAAATCCAGGCTCGAACTCAGCAAACCCCTGTATGTGCTTGTATTGCTCAGTCTTCATCTGCATTCGCTTCCTTCTTTCTGTCCTTTCTTGTCTCTATAGATAATGATGCTGATTTCTATTTTTTCCCTCAGCAGGATATCAAAGGTGAAGTCAACATTGGTACCATGCAGAGATCCTTGCCTATGGATCCTTCATCAATTTATGGGCAGGGAGGAATGCAGTCAAAGCCTGGAATTGCAAATGCAGGATTAAATCCAGGAGTTGGTAGTCTCACATTGAAAGGATGGCCTTTAACTGGTATTGATCAAATTCGTCCTAGTTTTGGAGCACAAGTTCAGAAGCCTCTCCTTCAAAGTGCAAATCAGTTTCAGCTTTTGCCACAACAACAACAACAGCTCCTTGCACAGGTACAAGCACAAGGAAATATTGGCAATTCCTCAGTTTATGGAGATATGGATCCACAACGATTAAGGGGATTAGCTAGGGGAAGTTTAAATGCTAAAGATGGTCAGTCAATTGCAAATGATGGATCAATAGGCTCTCCAATGCAATCTACTTCATCTAAG 1260 0.4238 MPNPKVPRSRFSKLYINQVQYGSSLHPNLLLGFVNFASDREIMAQSNWEADKMLDVYIYDYLVKKKLHNTAKAFMTEGKVSPDPVAIDAPGGFLFEWWSVFWDIFIARTNEKHSETAAAYLEAQQIKAKEQQQLQMQQLQLIRQAQLQRRDSNHPPLGGPVNAITTEGVLGQSTASALAAKMYEERMKHSNPMDTETSQPLLDARMALLKSTNHPGQMVQGNSGSVTAALQQIQARTQQTPVCACIAQSSSAFASFFLSFLVSIDNDADFYFFPQQDIKGEVNIGTMQRSLPMDPSSIYGQGGMQSKPGIANAGLNPGVGSLTLKGWPLTGIDQIRPSFGAQVQKPLLQSANQFQLLPQQQQQLLAQVQAQGNIGNSSVYGDMDPQRLRGLARGSLNAKDGQSIANDGSIGSPMQSTSSK 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13477g00002 420 ProSiteProfiles LIS1 homology (LisH) motif profile. 50 82 IPR006594 GO:0005515
Mupr13477g00002 420 PANTHER TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8 43 405 IPR044716 GO:0003714
Mupr13477g00002 420 MobiDBLite consensus disorder prediction 394 420 - -
Mupr13477g00002 420 MobiDBLite consensus disorder prediction 399 420 - -
Mupr13477g00002 420 SMART Lish 50 82 IPR006594 GO:0005515
Mupr13477g00002 420 Pfam LisH 52 78 IPR006594 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13477g00002 Mupr-Chr13477 2349 5077 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR LUG Mupr13477g00002 LisH 3.1e-08 CL0561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13477g00002 - - var:108326218 593.578