Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13455g00003 ATGATCATTGAGTTGAGGCAGGAGCTTTTGATTTCCTCTAACAAGATCATTGAGGGTCATGGTGTGAACTATGTGAACAATGTCATCATCCATGGAATTCACATAAAGAAAATTGTACCCAAAGATGGCGGCATGATTCGGGACTCCTACACCCACTTTGGGTTGAGGATAAGGAGCAACGTCAACGCCATCTCCATATTTGGAGCCTCCAATATTTGGATAGATCATGTTTCCCTCTCTAACTCCGCTAACAGTCTTATCAATGTTATCATGGACTCCACTGCCATCACCATCTCAAATTGTCACATGATTAAACATAACAATGTGATTCTATTTGGGGCCAAATACCAGCACCAAGCAATAATGAGCTAA 372 0.414 MIIELRQELLISSNKIIEGHGVNYVNNVIIHGIHIKKIVPKDGGMIRDSYTHFGLRIRSNVNAISIFGASNIWIDHVSLSNSANSLINVIMDSTAITISNCHMIKHNNVILFGAKYQHQAIMS 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13455g00003 123 SMART amb_all 1 123 IPR002022 -
Mupr13455g00003 123 SUPERFAMILY Pectin lyase-like 1 117 IPR011050 -
Mupr13455g00003 123 Gene3D - 1 122 IPR012334 -
Mupr13455g00003 123 PANTHER PECTATE LYASE 18-RELATED 1 119 IPR045032 GO:0030570
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13455g00003 Mupr-Chr13455 4559 4966 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13455g00003 1 118 Polysaccharide Lyase AT1G14420 51.538 2.48e-40 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13455g00003 K01728 - gmx:100810615 150.984