Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1344g00002 ATGGCCGCACCTTCACTTTCCTCCGCTCTCAATTCCCTCTCTTCTCTTACCTCTTCCCGCTTCTCTCTCCTCCCCCCTCCACCCACCACCAAGTTCTCCCTCTTCTCCAAACCCTTCCTCCTCTCCGCCACCGCCATTGCCATTCCCAAATCGAAGTCCTCCGACGACATCGACACCTCCTTCTTCGACAACGTCAACCCCCTCGACGACATCCCTTTCAACCCTCCGGAGCCCCCTGAGGGTTTCGTCGCCCCTCCGTACTTCGACGACGGCCCCCTCGAGACCGAAGACGAAATCGCCGCCGCCTACGAGGAGCTCTACGGCCCGGCCTACAGTGGTGTCAGCGTCCTCGGCAACGACATCTACGTGATGGACGCCAAGGTCAAGAAGCAAACCGGGTTCGGCTCCGGAGCCAAGAAGGAGAAGGTCCGCGACGGCTTCGAAGAGAGGGTCGTGCAGGTCAGGAGGGTCACCAAGGTTGTTAAGGGAGGCAAGCAGCTTAGGTTCAGAGCCATTGTTGTTGTCGGCGACAAGAAGGGTCAAGTCGGTGTCGGTGTTGGCAAGGCCAAGGAAGTTATTTCCGCCGTTCAGAAGTCCGCTATCAATGCCCGCAGGAACATCGTCAAGGTCCCTATGACTAAGTACTCCACTTTTCCCCATAGAGCTGATGGAGATTATGGAGCAGCGAAGGTGATGCTTAGACCTGCTTCTCCTGGTACTGGAGTTATTGCAGGTGGGTCTGTGAGAGTTGTTCTTGAAATGGCAGGAGTTGAGAATGCCTTGGGAAAGCAACTAGGGAGTAATAATGCACTCAACAATGCCAGAGCGACCGTTGTTGCCGTGCAGAAAATGAGGCAGTTTCGTGAGGTTGCTGAGGAGCGCGGAATTCCAATGGAAGAATTGTGGAAAGACTATTCAGTTGCAGAAAAGGACTGTGTAGATCTTTCACCAGCAGAGAGAGGGTACTCGTCATCTTTGATTAAGGAACCATGGTGGCTGATC 1002 0.5459 MAAPSLSSALNSLSSLTSSRFSLLPPPPTTKFSLFSKPFLLSATAIAIPKSKSSDDIDTSFFDNVNPLDDIPFNPPEPPEGFVAPPYFDDGPLETEDEIAAAYEELYGPAYSGVSVLGNDIYVMDAKVKKQTGFGSGAKKEKVRDGFEERVVQVRRVTKVVKGGKQLRFRAIVVVGDKKGQVGVGVGKAKEVISAVQKSAINARRNIVKVPMTKYSTFPHRADGDYGAAKVMLRPASPGTGVIAGGSVRVVLEMAGVENALGKQLGSNNALNNARATVVAVQKMRQFREVAEERGIPMEELWKDYSVAEKDCVDLSPAERGYSSSLIKEPWWLI 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1344g00002 334 ProSiteProfiles S5 double stranded RNA-binding domain profile. 147 210 IPR013810 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Mupr1344g00002 334 Gene3D - 130 208 - -
Mupr1344g00002 334 FunFam 30S ribosomal protein S5 212 303 - -
Mupr1344g00002 334 FunFam 30S ribosomal protein S5 136 208 - -
Mupr1344g00002 334 Pfam Ribosomal protein S5, C-terminal domain 224 294 IPR005324 GO:0003735|GO:0005840|GO:0006412
Mupr1344g00002 334 Pfam Ribosomal protein S5, N-terminal domain 147 211 IPR013810 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Mupr1344g00002 334 PANTHER RIBOSOMAL S SUBUNIT 140 304 IPR000851 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Mupr1344g00002 334 ProSitePatterns Ribosomal protein S5 signature. 164 196 IPR018192 -
Mupr1344g00002 334 Gene3D - 213 303 IPR014721 -
Mupr1344g00002 334 SUPERFAMILY dsRNA-binding domain-like 143 212 - -
Mupr1344g00002 334 SUPERFAMILY Ribosomal protein S5 domain 2-like 217 295 IPR020568 -
Mupr1344g00002 334 NCBIfam 30S ribosomal protein S5 146 300 IPR005712 GO:0003735|GO:0006412|GO:0015935
Mupr1344g00002 334 Hamap 30S ribosomal protein S5 [rpsE]. 124 300 IPR005712 GO:0003735|GO:0006412|GO:0015935
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1344g00002 147 287 Cytoplasmic Ribosomal Protein Gene Family AT2G41840 32.886 5.21e-17 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1344g00002 K02988 - gmx:100787105 454.521