Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1344g00001 ATGGAAGGCTTTTTTGCACCATTTTCAAACACAACTGCCAACCAATCCACCACCACCACCACCACTAGTACCACCTCATCCTCTTCAAACATAAACCTTCCACCACAAAACATGGGTCATCCACAAAATGTTAACGTTACTGACAACAATGGACAACTTGGTCATCCTGAACCTTATTTTGTTCCATATAATCAAAACATGTCGTTCCAACAACATGTGCATTCATTTTCCCAAGTGAATCAATATCCTATGTATTCCTTTCCAGTGGGGCAAAGTAATATACCTTTTAGAATGCCAAATTTTGAACTTCAAGGTTGGTCGCAGCAAGGGGAAGAAGGTAGAAATAAGATGATGGAAGCACATACGAGTAAAGCTGCTAGGGATAGAAGGAAACAAGCAAGACAAAGGAGTAGAAGTTCTGCTCCTATGGCTCCTCAGGTACCAGAAAGGACAATAAGGCAACAACCTATTACTGGTGGAGGGTCAAATGTGAGGATGACAATCAAGCAAGACATATACACCAATGTTTTTTACACCCCAGATGGGAAGAGGCTAGAAGAAATTTTGACAAAGAAGTTAAAGAAGAGTGATGTTGGCGTCCTGGGCCGCATTGTGCTCCCAAAGAGGGAGGCTGAGTATAAGCTTCCAGTACTGGCGGACAAGGAAGGAATAGATGTTGTGTTTAAGGATGTATATTCTGAGCTGCGATGGACCTTGAAATACAGGTACTGGATTAATAACAAAAGTAGAATGTATGTTCTCGAAAATACAGGGGATTTTGTGAACCATTATGAGTTACAAATGGAAGATTCTATTACCCTTTATGAGGACGAAATTAAAAATCTGTATGTGCTGATAAAAAAGGAGCAAAATGTAGAAGTATCTGAGCCCTCAAGCATGGAAAGTCTGCATACACAGAACACTTTCAACTTTAGCCCCATGGATGCACCCTATGTACACCAAGATAAAGATAAAGAAGAAGAATCATATTTGGCTTTATTAGAGCTTAACCATGAGAAGAAAGCAGAAGCTGCTAACAACCTTTTGATCCAGTGCGCTGGTGGAAGTTCTTCAAGTGGAACAAAGGATGAGAACATAGCGCAACATCAATCATTGAACAATGCTCCGGAGGGGGCCCCAAGCCAAGCAACTGAAGAAGCCGCAGCACCACCAGTGCCCCGCGGTGATCGGAACATATTGATAAATGATGACAACTTCGATGAGGTCTACGGGAACCTTGACAATATCTTTGAAATTGAGAATAATGGTTTTGATGACTTCGACTTGCACCAACATGTATGA 1302 0.4147 MEGFFAPFSNTTANQSTTTTTTSTTSSSSNINLPPQNMGHPQNVNVTDNNGQLGHPEPYFVPYNQNMSFQQHVHSFSQVNQYPMYSFPVGQSNIPFRMPNFELQGWSQQGEEGRNKMMEAHTSKAARDRRKQARQRSRSSAPMAPQVPERTIRQQPITGGGSNVRMTIKQDIYTNVFYTPDGKRLEEILTKKLKKSDVGVLGRIVLPKREAEYKLPVLADKEGIDVVFKDVYSELRWTLKYRYWINNKSRMYVLENTGDFVNHYELQMEDSITLYEDEIKNLYVLIKKEQNVEVSEPSSMESLHTQNTFNFSPMDAPYVHQDKDKEEESYLALLELNHEKKAEAANNLLIQCAGGSSSSGTKDENIAQHQSLNNAPEGAPSQATEEAAAPPVPRGDRNILINDDNFDEVYGNLDNIFEIENNGFDDFDLHQHV 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1344g00001 433 CDD B3_DNA 188 288 IPR003340 GO:0003677
Mupr1344g00001 433 MobiDBLite consensus disorder prediction 372 400 - -
Mupr1344g00001 433 MobiDBLite consensus disorder prediction 1 42 - -
Mupr1344g00001 433 MobiDBLite consensus disorder prediction 7 42 - -
Mupr1344g00001 433 Pfam B3 DNA binding domain 190 287 IPR003340 GO:0003677
Mupr1344g00001 433 SUPERFAMILY DNA-binding pseudobarrel domain 188 286 IPR015300 -
Mupr1344g00001 433 SMART B3_2 189 290 IPR003340 GO:0003677
Mupr1344g00001 433 Gene3D - 178 297 IPR015300 -
Mupr1344g00001 433 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 98 336 IPR044800 GO:0003700
Mupr1344g00001 433 MobiDBLite consensus disorder prediction 109 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1344g00001 Mupr-Chr1344 9783 14925 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1344g00001 114 349 B3 DNA Binding Superfamily AT1G28300 40.496 9.50e-38 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mupr1344g00001 B3 9.5e-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1344g00001 K09287 - gmx:102662409 293.508