Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1342g00002 ATGAGTCCTCATGCCTTAAACACCAATGTGAATGCCCTTGATCACTTTGAGCTCCCTGTCACGACGTCGTTTCAGGATGCTTCCGCATCATTTCCGTCGACGGCGGCGTTCAGCCGGAGCTCAAGCTTCCGGAACATTTTCTTTACGGAGAACTGGGCGGAGCTGCCGTTGAAGGAGGATGACGCCGACGACATGGTTATCTACGGCGCTTTGCATGAGGCCGCCACCACCACCGGATGGTTTCCCACCGGCGGCAATGGGGTGAGTAATGTTGGTGTAACAGTGAAAATGGAAAATGAGAGTCAAAATAGTGGCAATGCAGCCGCGCGTGAAACTCACGCGCCTCCAAGGAAGGGTTGGAACTACCGGGGCGTGCGGAGGAGGCCATGGGGAAAGTATGCAGCGGAGATAAGAGACGTTAAGAGGAATGGTATGAGAGTGTGGCTTGGAACCTATGGAACCGCTGAGGATGCAGCTTTAGCTTATGATCGAGCCGCATTTAAAATGCGCGGCTCAAAAGCTAAACTTAATTTTCCTCATTTAATTGGTTCAGAATCTGTTGAGCCAATTAAGGTTACGCTAAAGAAACGTTTATCCGATGTTTCTTTGTCGTGTCCATCTTCATCCACGGTGCCTGCAAAGCGGAGGAAGGATGGTTGTTTGGCAGATTTGGAGTTAGAATGA 684 0.5044 MSPHALNTNVNALDHFELPVTTSFQDASASFPSTAAFSRSSSFRNIFFTENWAELPLKEDDADDMVIYGALHEAATTTGWFPTGGNGVSNVGVTVKMENESQNSGNAAARETHAPPRKGWNYRGVRRRPWGKYAAEIRDVKRNGMRVWLGTYGTAEDAALAYDRAAFKMRGSKAKLNFPHLIGSESVEPIKVTLKKRLSDVSLSCPSSSTVPAKRRKDGCLADLELE 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1342g00002 227 ProSiteProfiles AP2/ERF domain profile. 121 179 IPR001471 GO:0003700|GO:0006355
Mupr1342g00002 227 PANTHER DNA-BINDING DOMAIN 83 195 IPR044808 GO:0003700|GO:0009873
Mupr1342g00002 227 Gene3D AP2/ERF domain 121 180 IPR036955 GO:0003700|GO:0006355
Mupr1342g00002 227 CDD AP2 121 181 IPR001471 GO:0003700|GO:0006355
Mupr1342g00002 227 FunFam Ethylene-responsive transcription factor 2 121 180 - -
Mupr1342g00002 227 Pfam AP2 domain 122 171 IPR001471 GO:0003700|GO:0006355
Mupr1342g00002 227 SUPERFAMILY DNA-binding domain 122 180 IPR016177 GO:0003677
Mupr1342g00002 227 SMART rav1_2 121 185 IPR001471 GO:0003700|GO:0006355
Mupr1342g00002 227 PRINTS Ethylene responsive element binding protein signature 161 181 IPR001471 GO:0003700|GO:0006355
Mupr1342g00002 227 PRINTS Ethylene responsive element binding protein signature 122 133 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1342g00002 Mupr-Chr1342 21468 22151 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1342g00002 37 204 AP2-EREBP Transcription Factor Family AT2G44840 52.976 2.73e-56 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr1342g00002 AP2 3.6e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1342g00002 K09286 - gmx:100793366 290.041