Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1342g00001 ATGGCTAGTGATTTTTCTTCACGTGTTCAATCTTATCACCTTGAGCATGATTCCCACACCCTCGTGAATGTTTCCGATCGCGAAAACACCTTTTATTCGCATCCGTTTCCAAACCCTACGCATGTTGATGACGTGACGCAATCATGGGCATGCAAAACGGAAGAGCGTGAGACGCACGCGCCTCCGGAGTGGAAGCGCTTCCGGGGTGTGAGGCGGCGGCCGTGGGGGAAGTTTGCGGCGGAGATATGGGATCCGAAGAGGAAGCACGGTAGGGTTTGGCTTGGGACGTATGAGACTGAAGAGGAAGCTGGCTTGGCTTATGATAGAGCTGCTTTCAAGATGAGAGGTAGTAAAGCAAAATTAAATTTTCCACACCTAGTTGGATCCCACGCGCCGCCGGAGGGAGTGGGAGTGGTAGCGGCTCCGATGCAAAAGTCGCCGGATCCTTGTTTGCCTCCTTTGCCTGTGATGGAGGATAGCTCACAGCCGCAACAAGGGTCAAAGAAAAGGAAGAACCTAGCTGAATTGCTTAATAGGTTAGCCAAGAACAAAAGCCAAATGGTACGGAGGTTTCATGATGAAAATAATCTCAATCTTTTACAAATGGGCCAACCCTAA 618 0.5016 MASDFSSRVQSYHLEHDSHTLVNVSDRENTFYSHPFPNPTHVDDVTQSWACKTEERETHAPPEWKRFRGVRRRPWGKFAAEIWDPKRKHGRVWLGTYETEEEAGLAYDRAAFKMRGSKAKLNFPHLVGSHAPPEGVGVVAAPMQKSPDPCLPPLPVMEDSSQPQQGSKKRKNLAELLNRLAKNKSQMVRRFHDENNLNLLQMGQP 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1342g00001 205 PRINTS Ethylene responsive element binding protein signature 67 78 IPR001471 GO:0003700|GO:0006355
Mupr1342g00001 205 PRINTS Ethylene responsive element binding protein signature 106 126 IPR001471 GO:0003700|GO:0006355
Mupr1342g00001 205 PANTHER DNA-BINDING DOMAIN 43 172 IPR044808 GO:0003700|GO:0009873
Mupr1342g00001 205 CDD AP2 65 126 IPR001471 GO:0003700|GO:0006355
Mupr1342g00001 205 SMART rav1_2 66 130 IPR001471 GO:0003700|GO:0006355
Mupr1342g00001 205 FunFam Ethylene-responsive transcription factor 2 65 125 - -
Mupr1342g00001 205 SUPERFAMILY DNA-binding domain 66 125 IPR016177 GO:0003677
Mupr1342g00001 205 ProSiteProfiles AP2/ERF domain profile. 66 124 IPR001471 GO:0003700|GO:0006355
Mupr1342g00001 205 MobiDBLite consensus disorder prediction 145 171 - -
Mupr1342g00001 205 Pfam AP2 domain 66 116 IPR001471 GO:0003700|GO:0006355
Mupr1342g00001 205 Gene3D AP2/ERF domain 65 126 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1342g00001 Mupr-Chr1342 3631 4313 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1342g00001 53 151 AP2-EREBP Transcription Factor Family AT2G44840 58.824 2.16e-33 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr1342g00001 AP2 4.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1342g00001 K09286 - gmx:100792115 276.559