Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13429g00002 ATGGCAGACGCTGAGGATATTCAACCCCTTGTTTGCGACAATGGAACAGGAATGGTTAAGGCAGGATTTGCAGGAGACGATGCCCCACGTGCTGTGTTTCCTAGCATTGTTGGACGTCCTCGTCACACTGGTGTGATGGTTGGCATGGGCCAGAAAGATGCTTATGTTGGAGATGAGGCACAGTCTAAGCGTGGTATTCTGACTCTCAAATACCCAATTGAGCATGGTATTGTTAGCAATTGGGATGATATGGAAAAGATTTGGCATCATACCTTCTATAATGAGCTCCGTGTGGCCCCTGAAGAGCACCCGGTTCTCTTGACCGAGGCTCCTCTTAACCCAAAGGCTAACAGGGAGAAGATGACCCAAATCATGTTTGAGACTTTTAATGCCCCTGCTATGTATGTAGCCATTCAGGCTGTTCTTTCGTTGTACGCCAGTGGTCGTACAACTGGTATTGTGTTGGATTCTGGGGATGGTGTCAGCCACACGGTCCCTATCTACGAGGGTTATGCCCTCCCACACGCTATCCTTCGTCTTGATTTGGCTGGTCGTGACCTCACTGATTTCTTGATGAAGATTCTGACTGAGCGTGGATATTCTTTTACCACCTCAGCAGAGCGTGAAATTGTGAGGGATATGAAGGAAAAGTTGGCTTACATAGCCCTCGATTATGAGCAAGAGCTGGAGACATCCAAGACCAGCTCTTCAGTGGAGAAAAGCTATGAGTTGCCTGATGGGCAGGTTATCACTATCGGCGCTGAGCGATTCAGGTGTCCAGAGGTCTTGTACCAACCATCCATGGTGGGAATGGAAGCAGCAGGCATTCATGAAACCACATACAACTCCATAATGAAATGTGATGTTGACATCAGGAAAGACCTGTATGGCAACATTGTCCTTTCAGGAGGTACAACCATGTTCCCTGGCATTGCTGATAGAATGAGCAAGGAAATTTCTGCTTTAGCTCCCAGCAGCATGAAGATCAAGGTGGTGGCGCCTCCTGAGAGGAAGTACAGTGTCTGGATTGGAGGTTCTATCTTAGCATCCCTCAGCACCTTCCAGCAGATGTGGATTGCGAAGGCAGAGTACGATGAGTCTGGACCCTCAATTATCTTGATCCAACTCGATGATAACTAA 1140 0.4789 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDFLMKILTERGYSFTTSAEREIVRDMKEKLAYIALDYEQELETSKTSSSVEKSYELPDGQVITIGAERFRCPEVLYQPSMVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIILIQLDDN 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13429g00002 379 SUPERFAMILY Actin-like ATPase domain 6 155 IPR043129 -
Mupr13429g00002 379 ProSitePatterns Actins signature 1. 55 65 IPR004001 -
Mupr13429g00002 379 FunFam Actin, alpha skeletal muscle 3 164 - -
Mupr13429g00002 379 ProSitePatterns Actins and actin-related proteins signature. 106 118 IPR020902 -
Mupr13429g00002 379 PRINTS Actin signature 117 130 IPR004000 -
Mupr13429g00002 379 PRINTS Actin signature 51 62 IPR004000 -
Mupr13429g00002 379 PRINTS Actin signature 63 85 IPR004000 -
Mupr13429g00002 379 PRINTS Actin signature 142 161 IPR004000 -
Mupr13429g00002 379 PRINTS Actin signature 28 37 IPR004000 -
Mupr13429g00002 379 PRINTS Actin signature 238 254 IPR004000 -
Mupr13429g00002 379 Gene3D Actin; Chain A, domain 4 182 273 - -
Mupr13429g00002 379 FunFam Putative actin-related protein 5 341 369 - -
Mupr13429g00002 379 FunFam Actin, muscle 182 273 - -
Mupr13429g00002 379 Pfam Actin 5 372 IPR004000 -
Mupr13429g00002 379 Gene3D - 140 340 - -
Mupr13429g00002 379 SMART actin_3 7 377 IPR004000 -
Mupr13429g00002 379 ProSitePatterns Actins signature 2. 358 366 IPR004001 -
Mupr13429g00002 379 PANTHER ACTIN 9 370 IPR004000 -
Mupr13429g00002 379 SUPERFAMILY Actin-like ATPase domain 149 373 IPR043129 -
Mupr13429g00002 379 FunFam Major actin 261 340 - -
Mupr13429g00002 379 CDD NBD_sugar-kinase_HSP70_actin 10 183 - -
Mupr13429g00002 379 Gene3D - 10 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13429g00002 Mupr-Chr13429 12094 14145 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13429g00002 1 372 Cytoskeleton Gene Families AT3G12110 96.774 0.0 754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13429g00002 K10355 - gmx:100798523 736.873