Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13424g00009 ATGGCTGATAAGCAACCCCAACTAAACGGTGCGTATTACGGCCCCTCGATTCCTCCGTCGGAGCCACCGCGCCACCACTCTCACGGCTGCAGAAGGTGCTGCTGCTGCCTCTTCAGCTGCTTCCTCACAATCGTGGTCATCGTCGTGGTCGCATTCCTCGTATTCTGGGTCGTGGTCCAACCGCGAGACTTCAGGTTCCACGTGGCGGAAGCGCGGCTCAAGCAGTTCAACTACACCGACAACACCCTGCACTACAACCTCGTCCTGAACTTCACCGCGCGAAACCCGAACAAGAGGCTCAACATCTACTACGACAAAGTGGAGGGTCACGTGTCCTACGACGGGGTCAGGTTCGGTTCGGCAGACGTGGTGACGTGGCAGAATTCGTTCCGCCAGTTCGCCAAGAGCACGGACAGCATGAGCGCGGTCTTCGCGGGGCAGCGCGTGAGGGCGTTTGATCGCGACCAGGCCAAAGATTTCGACGAAGATAAGAAAAATGGTGTTTTTGACATCAACGTGAGACTCTACTTTATTATTAGGTTCAGGCTCGGTGACGTCATAGGTAGCGACACGAAGGCCAAGGCGAAATGCGAACTTGAGATTCCTTTCGGTTCCGAGGGAAGAACCGCTGTGGGTGTAAACGCCGCCGCGTCGGTTCCGGCAAAAGAGCGCCTCCGCACAAGATGCTGCTACTGCCTCAGCCAAACCCTCTGGGTCCTTCTGGTCCTCATAATCGTCCTGGTCATGCTCGTGATTCTGGTATTGTACATCATCATCACACCTCGCTCCTTCAAGTTCCACGTGACCGAAGCGAGGCTCGCCCAGTTCGACTACACGGCCAACAACACCCTCCTCCGATACAACCTCGTCCTTAACATCACCGCGCAAAACCCCAACAAGAAGCTCAAGATCTACTACGACGTCGTTCAGGCCCATGCGCTCTACAAGGGCGTGAGGTTCTCCACCACCGACGTCGACATGCCCTGGAGGTCCTACCTACAGGACAAGAAGGGCACAGACCGCTTCAGCGCCATTTTCTCAGGACAACGTCTGATGGTGCTCGATCCAAACCAGGTTTCTGAGTTCCGCCAGGATGGGATTTTCCCTATTGATATTAAGATTCGTTTTAGGATTAGGTTCAGGCTCGGAAATCTTATCTCTGGGCACTTCAACGCCAGGGCCACGTGCGAGCTTGAGGTTCCTTTGGCTTCTTCTAAGGGGAAAACGGTGGCTCCGTTTGACCCCACCAAGTGCCAAGTCGATTTCTGA 1269 0.5508 MADKQPQLNGAYYGPSIPPSEPPRHHSHGCRRCCCCLFSCFLTIVVIVVVAFLVFWVVVQPRDFRFHVAEARLKQFNYTDNTLHYNLVLNFTARNPNKRLNIYYDKVEGHVSYDGVRFGSADVVTWQNSFRQFAKSTDSMSAVFAGQRVRAFDRDQAKDFDEDKKNGVFDINVRLYFIIRFRLGDVIGSDTKAKAKCELEIPFGSEGRTAVGVNAAASVPAKERLRTRCCYCLSQTLWVLLVLIIVLVMLVILVLYIIITPRSFKFHVTEARLAQFDYTANNTLLRYNLVLNITAQNPNKKLKIYYDVVQAHALYKGVRFSTTDVDMPWRSYLQDKKGTDRFSAIFSGQRLMVLDPNQVSEFRQDGIFPIDIKIRFRIRFRLGNLISGHFNARATCELEVPLASSKGKTVAPFDPTKCQVDF 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13424g00009 422 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 13 202 - -
Mupr13424g00009 422 Pfam Late embryogenesis abundant protein 91 179 IPR004864 -
Mupr13424g00009 422 Pfam Late embryogenesis abundant protein 293 396 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13424g00009 Mupr-Chr13424 18549 26595 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13424g00009 258 403 SNARE and Associated Proteins AT1G32270 30.872 1.96e-14 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13424g00009 - - ccaj:109813660 297.745