Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13422g00004 ATGGATTTTGGAGAGGGTTATGTATCAAATGAGCATCGCGAGCTGCATCGATCTGCAACAGAAAGTGCGGATCCATTATCTGTTTCCCCATTGCAAGTTTCTATTAAGACACCAAGATCTCCTAAATCTCCAAGGTCCCCTAACTCTTCTAGGTCTCCAAAATCTCCAAGGTCCCCAAAGGTGCAAGGCAAGTGCAGCAATCTAAGTCCAAAGACTCATAGACCATCATACTTTCAAAAAGATGGACGTCCTAAGAAAGGTGGTTCTGGGGGAAAAGGCACCTGGGGTGGATTGCTTGATACAGATGACACAAACGTTCTTGATCCTAATGATCCAAACTATGACAGCACTGAGGAATTTGACCATTCAAATGAAAAGAAACCGACAGAAGATCTTGAGAACTACAAGAAAAAAGCTACAGTAATAGTGGAGGAATACTTTGCCACTGATGATGTTGTTGCAACAATGAATGAACTTAAAGAGCTGGGAAAACCAGAGTATGGCTACTATTTTGTGAAGAAACTTGTCTCTATGTCCATGGACAGACATGACAAAGAAAAAGAAATGGCAGCTATTCTGTTATCTGCACTTTATGCAGACATATTTCATCCTTCACAAGTTTACAAAGGCTTCAGCAAATTAGTTGAATCAACGGATGATCTGATTGTAGATATACCAGACACTGTTGAAGTCCTAGCACTTTTCATAGCTCGAGCCGTGGTAGATGACATACTTCCTCCTGCATTTTTGAAGAAACAGATGGCCTACTTGCCCAAAGATTCAAAAGGGGTTGAAGTCTTGAAGAAAACTGAGAAAAGCTACCTAGCAGCCCCTCTTCATGCAGAAATCATAGAGAGATGCTGGGGAGGTAGTAAGAATACCACAGTTGATGATGTTAAAGCCAAGATAAACAATTTTTTGAAGGAATATGTTGTAAGTGGTGACAAGAAAGAAGCCTTCAGATGCATCAAAGATCTGAAAGTTCCTTTCTTCCATCACGAAATAGTGAAACAGGCTCTTATAATGGCAATGGAGAAACGTCAAGCAGAATTCCCACTGCTGGACTTGTTGAGGGAAGCAGCTGAAGAAGGTTTCATCAACTCTAGCCAAATGTCCAAAGGGTTTGGCCGGTTGATTGACACAGTTGATGACTTATCACTGGACATACCAAATGCACACGAAATACTGCAGCAACTAATGTCAAAAGCAGCATCTGAGGGTTGGTTATGTGTGTCATCTTTGAAATCACTTACAGTGGAGCCTGAGAAGAACTCAATAGAAGATAGTGCTGCCAAAAGTTTCAAGGTGAAGACTCAGTCCATCATCCAAGAGTACTTTTTATCAGGTGATATAGTG 1356 0.4115 MDFGEGYVSNEHRELHRSATESADPLSVSPLQVSIKTPRSPKSPRSPNSSRSPKSPRSPKVQGKCSNLSPKTHRPSYFQKDGRPKKGGSGGKGTWGGLLDTDDTNVLDPNDPNYDSTEEFDHSNEKKPTEDLENYKKKATVIVEEYFATDDVVATMNELKELGKPEYGYYFVKKLVSMSMDRHDKEKEMAAILLSALYADIFHPSQVYKGFSKLVESTDDLIVDIPDTVEVLALFIARAVVDDILPPAFLKKQMAYLPKDSKGVEVLKKTEKSYLAAPLHAEIIERCWGGSKNTTVDDVKAKINNFLKEYVVSGDKKEAFRCIKDLKVPFFHHEIVKQALIMAMEKRQAEFPLLDLLREAAEEGFINSSQMSKGFGRLIDTVDDLSLDIPNAHEILQQLMSKAASEGWLCVSSLKSLTVEPEKNSIEDSAAKSFKVKTQSIIQEYFLSGDIV 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13422g00004 452 SMART ma3_7 299 410 IPR003891 -
Mupr13422g00004 452 SMART ma3_7 135 246 IPR003891 -
Mupr13422g00004 452 ProSiteProfiles MI domain profile. 134 255 IPR003891 -
Mupr13422g00004 452 ProSiteProfiles MI domain profile. 298 419 IPR003891 -
Mupr13422g00004 452 MobiDBLite consensus disorder prediction 1 20 - -
Mupr13422g00004 452 Pfam MA3 domain 136 246 IPR003891 -
Mupr13422g00004 452 Pfam MA3 domain 300 409 IPR003891 -
Mupr13422g00004 452 Gene3D - 284 417 - -
Mupr13422g00004 452 PANTHER PROGRAMMED CELL DEATH 4 46 451 IPR039778 GO:0045892
Mupr13422g00004 452 SUPERFAMILY ARM repeat 295 416 IPR016024 -
Mupr13422g00004 452 Gene3D - 122 273 - -
Mupr13422g00004 452 FunFam Programmed cell death protein 4 284 420 - -
Mupr13422g00004 452 MobiDBLite consensus disorder prediction 1 131 - -
Mupr13422g00004 452 FunFam programmed cell death protein 4 124 277 - -
Mupr13422g00004 452 SUPERFAMILY ARM repeat 128 292 IPR016024 -
Mupr13422g00004 452 MobiDBLite consensus disorder prediction 22 74 - -
Mupr13422g00004 452 MobiDBLite consensus disorder prediction 115 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13422g00004 Mupr-Chr13422 24552 27500 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13422g00004 298 409 Eukaryotic Initiation Factors Gene Family AT4G30680 29.915 7.63e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13422g00004 - - gmx:102668745 772.696