Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13419g00002 ATGGCGGAGCGTGCTTCTTACGGATTGGGACCTCGATTAGATATTCAGCAATTACAACTGGAAGCCCAGCATAGGTGGTTGCGCCCTGCAGAAATATGTGAAATTCTTCGCAATTATCGGCTGTTTCAAATCACATCAGAACCACCCAACAGGCCACCAAGTGGTTCCCTTTTTCTTTTTGATCGGAAGGTTTTAAGGTACTTTAGAAAGGATGGACATAATTGGAGAAAGAAAAAAGATGGAAAGACTGTGAAGGAAGCTCATGAAAAGTTGAAGGCAAGCATGAAATTTTCTTTTGTTGAGTTTGTGGTGGGAAGTATTGATGTGTTACACTGCTACTATGCCCATGGAGAAGAAAATGAAAATTTTCAGAGGCGAAGCTATTGGATGCTTGAACAGGATATGATGCATATAGTATTTGTCCACTACTTGGATGTTAAGGTTAACAAAACCAATATTGGTGGAAATACATATACTAATGAGGCTACATCAGATTCCCAGAATGGCAGTTCTTTGTCATCTGGCTTTCCCAGAAGTTATGGTAGTGTGCCTTCTGGAAGTACAGATGCCATGAGCCCAACTAGCACTTTGACATCTTTATGTGAAGATGCTGATTCAGAGGATATTCATCAAGCAAGTTCAGGAATACACTCTTACCGCGAATCACAAAATTTGGGGAATGATCGTCCGATGGATAAGATCAATGCTTGTTCAAATAGTTCATATCTTATGCAATCATTTTCAGGTAATCCTGGACAGTTACCAATTTCTGGAACAGAATATATCCCACTTGTTCAGGGGGGTACGTCTAGAGCTAGTGATACTACTTACATTGAGGGTCAGAGAGCCCATGGCACTGCATCCTGGGACATTGCCATGGAACAGTCTGCAGGAAAGCATACCAACTCTTCTATTGTATCATCTACATCCATTCCATCAAGTGCACTGGGAAACATCCTTGAAGACCATACTGTTCCAGGCAACCTTTTAGGGCGTAAAAATGCTCTCACTGAAGAGGAAAGGGGCTCTCCGCCTGTCCAATCAAATTGGCAGATTCCTTTTGAAGACAGTACAGGAGAATTGTCTAAGTGGGGCACCCAATCATTGGGTTTGGAATTTGATTCTGGTTATGACTCTAGTTTACTGGGTGATGTAACTAATAATGCAAGTCCAGAAATTGTTCCTGAGCTGTTCACTTTTAATGGTGACCCAAAAGAGCAGACACATGCACAATCTCAACCTGCACTGAAATCCAATTCTGAATATGAAGTTCCCAGTGAAGCAAGTATCAACTATACCTTGACTATGAGGCGTGGATTATTGGATGGAGAGGAGAGCTTAAAGAAGGTTGATAGTTTCTCTAGGTGGATTACTAAAGAACTTGCAGGTGTGGATGATCTGCATATGCAGTCTTCCCCTGGTATTTCATGGAGCACAGATGAATGTGGTGAGGTGATAGATGATACCTCATTGAACCTGTCCCTCTCTCAAGACCAGCTGTTTAGCATAAACGATTTTTCACCTAAATGGGCTTATGCCCAATCAGAAATTGAGGTGTTGATTGTTGGAACATTTTTGAAGAGTCAACCTGAGGTGGCAACATGTAACTGGTCCTGTATGTTTGGGGAAGTGGAGGTTCCTGCTGAGGTTTTAGCTAACGGAATTCTGTGCTGTCAAGCTCCACCTCATAAAATTGGACGGGTTCCCTTCTACGTAACATGTTCCAATAGGTTTGCTTGTAGTGAAGTTCGGGAATTTGAGTACAGAGAGGGCTCTGATAGAAACATAGATTTTGCAAATTATTTTAACAGTTCAACTGAAATGGTGCTTCATTTGCGACTGGTGGGGTTACTTTCTTTAAACTCGGTGCACACTTCGAATCAAGTGGTTGAGGGTGATATGGAGAAAAGAAACTTAATTTTCAAGCTTATTTCACTGAAAGAGGAAGAGGAATATTCAAGTAAGGAAGAGACAACTGTAGAGATGGATATATCAGAACACAAGTCGAAGGAGCATATGTTTCACAAGCAGGTTAAAGAGAAGTTGTACTCATGGCTTCTTCACAAAGTAACTGAAACTGGCAAGGGGCCTCTTGTATTAGATGAGGAGGGGCAAGGCGTGTTACATTTAGTTGCTGCTCTTGGTTACGATTGGGCCATAAAACCAATCATAACTGCTGGAGTCAATATCAACTTTCGTGATGTGAATGGACGGACAGCTCTACACTGGGCTGCATTCTGTGGCCGAGAGCGAACAGTTGCTGTCCTTATCTCCATGGGTGCAGCCGCTGGTGCATTGACAGATCCATGTCCAGAATTTCCTTCAGGTAGAACACCTGCAGATCTTGCTTCTAGCAACGGCCACAAAGGAATTTCTGGTTTTCTTGCAGAGTCATTATTAACTAGCCACCTCAAATCACTCACAATGGATGAAAATAAAGATGACAGGGAAGAAACTTCAGGAATGAAAGCAGTGCAAACGGTTTCAGAGAGAATTGCAACACCTGTGCTTTATGGTGATATACCAGATGCTATCTACCTTAAGGATTCTCTTAATGCTGTCCGTAATGCTACACAAGCTGCTGATCGTATACATCAGGTCTTCAGAATGCAGTCATTTCAGAGGAAGCAGTTAGCTGAGTATGAAGATGATGAATTCGGATTATCAGATCAACGAGCTCTTTCCCTCCTAGCTTCTAAGGCATGCAAATCTGGACAAGGAGAGGGTTTAGTCAATGCTGCTGCAATACAAATACAGAAAAAGTTCCGTGGTTGGAAGAAGAGAAAAGAATTCTTGATCATTCGTCAAAGAATTGTTAAAATCCAGGCCCATGTAAGAGGTCACCAGGTCAGAAAGCAGTATAAAACAGTCATTTGGTCCGTGGGAATCCTGGAAAAAGTCATATTACGCTGGCGGCGCAAGGGCAGTGGTTTACGTGGATTTCGATCGGATGCCCTGAATAAGGTACCCGTCCAAGCAAGCAAGGCTCCACAAGAGGATGATTATGATTTTCTCAAGGAAGGAAGGAAACAAAGTGAAGCAAGGTTCCAAAAGGCCCTTTCACGGGTGAAGTCCATGGTTCAGTATCCCGAGGCAAGGGCTCAATACCGGCGGGTGCTAAATGTAGTTGAGGACTTCCGTCAAACCAAGGGATGTAATTTGAATTTGATAAATTCCGAAGAAACAGTTGACGGTGTGGAGGATTTGATTGATATTGACATGCTTTTAGATGATGAAAATTTCTTACCTATAGCATTCGATTGA 3264 0.424 MAERASYGLGPRLDIQQLQLEAQHRWLRPAEICEILRNYRLFQITSEPPNRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKASMKFSFVEFVVGSIDVLHCYYAHGEENENFQRRSYWMLEQDMMHIVFVHYLDVKVNKTNIGGNTYTNEATSDSQNGSSLSSGFPRSYGSVPSGSTDAMSPTSTLTSLCEDADSEDIHQASSGIHSYRESQNLGNDRPMDKINACSNSSYLMQSFSGNPGQLPISGTEYIPLVQGGTSRASDTTYIEGQRAHGTASWDIAMEQSAGKHTNSSIVSSTSIPSSALGNILEDHTVPGNLLGRKNALTEEERGSPPVQSNWQIPFEDSTGELSKWGTQSLGLEFDSGYDSSLLGDVTNNASPEIVPELFTFNGDPKEQTHAQSQPALKSNSEYEVPSEASINYTLTMRRGLLDGEESLKKVDSFSRWITKELAGVDDLHMQSSPGISWSTDECGEVIDDTSLNLSLSQDQLFSINDFSPKWAYAQSEIEVLIVGTFLKSQPEVATCNWSCMFGEVEVPAEVLANGILCCQAPPHKIGRVPFYVTCSNRFACSEVREFEYREGSDRNIDFANYFNSSTEMVLHLRLVGLLSLNSVHTSNQVVEGDMEKRNLIFKLISLKEEEEYSSKEETTVEMDISEHKSKEHMFHKQVKEKLYSWLLHKVTETGKGPLVLDEEGQGVLHLVAALGYDWAIKPIITAGVNINFRDVNGRTALHWAAFCGRERTVAVLISMGAAAGALTDPCPEFPSGRTPADLASSNGHKGISGFLAESLLTSHLKSLTMDENKDDREETSGMKAVQTVSERIATPVLYGDIPDAIYLKDSLNAVRNATQAADRIHQVFRMQSFQRKQLAEYEDDEFGLSDQRALSLLASKACKSGQGEGLVNAAAIQIQKKFRGWKKRKEFLIIRQRIVKIQAHVRGHQVRKQYKTVIWSVGILEKVILRWRRKGSGLRGFRSDALNKVPVQASKAPQEDDYDFLKEGRKQSEARFQKALSRVKSMVQYPEARAQYRRVLNVVEDFRQTKGCNLNLINSEETVDGVEDLIDIDMLLDDENFLPIAFD 1087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13419g00002 1087 Pfam IPT/TIG domain 503 588 IPR002909 -
Mupr13419g00002 1087 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 13 1049 - -
Mupr13419g00002 1087 SUPERFAMILY E set domains 503 589 IPR014756 -
Mupr13419g00002 1087 Pfam IQ calmodulin-binding motif 936 955 IPR000048 GO:0005515
Mupr13419g00002 1087 Pfam IQ calmodulin-binding motif 913 931 IPR000048 GO:0005515
Mupr13419g00002 1087 Gene3D - 911 957 - -
Mupr13419g00002 1087 Gene3D Immunoglobulins 496 593 IPR013783 -
Mupr13419g00002 1087 MobiDBLite consensus disorder prediction 402 422 - -
Mupr13419g00002 1087 ProSiteProfiles Ankyrin repeat profile. 736 768 IPR002110 GO:0005515
Mupr13419g00002 1087 MobiDBLite consensus disorder prediction 404 422 - -
Mupr13419g00002 1087 FunFam Calmodulin-binding transcription activator 2 910 958 - -
Mupr13419g00002 1087 Gene3D - 663 808 IPR036770 -
Mupr13419g00002 1087 ProSiteProfiles Ankyrin repeat region circular profile. 736 761 - -
Mupr13419g00002 1087 SMART ANK_2a 703 732 IPR002110 GO:0005515
Mupr13419g00002 1087 SMART ANK_2a 775 804 IPR002110 GO:0005515
Mupr13419g00002 1087 SMART ANK_2a 736 765 IPR002110 GO:0005515
Mupr13419g00002 1087 ProSiteProfiles IQ motif profile. 934 958 IPR000048 GO:0005515
Mupr13419g00002 1087 Pfam Ankyrin repeats (3 copies) 708 797 IPR002110 GO:0005515
Mupr13419g00002 1087 SUPERFAMILY Ankyrin repeat 692 797 IPR036770 -
Mupr13419g00002 1087 Pfam CG-1 domain 21 145 IPR005559 GO:0003677
Mupr13419g00002 1087 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 911 961 IPR027417 -
Mupr13419g00002 1087 SMART iq_5 910 932 IPR000048 GO:0005515
Mupr13419g00002 1087 SMART iq_5 933 955 IPR000048 GO:0005515
Mupr13419g00002 1087 FunFam Calmodulin-binding transcription activator 2 496 592 - -
Mupr13419g00002 1087 ProSiteProfiles IQ motif profile. 912 940 IPR000048 GO:0005515
Mupr13419g00002 1087 SMART CG_1_2 18 147 IPR005559 GO:0003677
Mupr13419g00002 1087 ProSiteProfiles CG-1 DNA-binding domain profile. 15 152 IPR005559 GO:0003677
Mupr13419g00002 1087 FunFam Calmodulin-binding transcription activator 2 665 812 - -
Mupr13419g00002 1087 MobiDBLite consensus disorder prediction 158 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13419g00002 Mupr-Chr13419 8112 18952 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13419g00002 1 1068 CAMTA Transcription Factor Family AT5G64220 54.771 0.0 1103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Mupr13419g00002 CG-1 1.1e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13419g00002 K21596 - gmx:100797717 1882.84