Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13416g00004 ATGTGTCCTCCAAAAACAGAACAAAGGGTTAGTCCGCACCAACACCTTCACTTGTCCTTGCTTTGCACCTTCAAAGTAATAATAACACGCATCGTTCACAACAAGTTTGCAATTACAATGGCTTCCAACGCCATCATCCAACGCACGTCTTCTTCATCTCACGTGGTAAGGACATATGATGTGTTTGTAAGCTTCCGCGGCGAAGACACACGCAACAATTTTACTGGTTTTCTCTTTCAAGCTCTTCGTAGAAAAGGTATTGATGCCTTCAAAGATGGTCAAGATCTCAAGAAAGGCGATTCCATAGCACCCGAGCTGCTACAAGCCATTCAATGCTCTCGCATTTTCATTGTTGTCTTCTCAAAGAACTATGCTTCCTCCACTTGGTGCTTGCGTGAACTAGCACACATCTTCAATTGCATTGGAACATCATCGACACACGTTCTGCCTATTTTTTATGATGTTGATCCATCTGAGGTGCGAAAACAAAGTGGATATTTTGAGAAAGCCTTTGCCGAACACGAAGAAAGATTCAGAGAGGATAAAGAGAAGATGGAGGAAGTGCAGAGATGGAGACACGCTCTCACACAAGTGGCCAATCTCTCTGGTTGGGATATCCGAAATAAGGCACAATATGCAGAGATTGAACAAATTGTTCTAAAAATAATAAATATATTGGGTCCCAAATTTTTAAGTCTTCCAAATGATGATCTAGTTGGGATGCAATCTCGTTTTGAAGAATTAGCAAAGCTTTTACATTTGGGGTCAATTAATGATGTTCGAGTTGTCGGAATTAGCGGGATGAGTGGAATAGGAAAGTCAACTGTTGTTGGTTCTTTATTTGAAAGAATCTCTCATCAATATGATTGTCGTTGTTTTATTGATGATGTAAGTAAAATTTATCGAGATTTTGGTACATTAGGCATATTAAAACAGTTACTTTCTCAGTGTCTAAATGAAAAAGAATTAAAGATTTGCAATGTTTATGAGGGAACATGTCTGGTATGGAATAGACTACGCAATGCAAGGGCTCTTATAGTTCTTGATAATGTTGATCAAGTTGGACAACTAAAGATGTTTACAGGGAGTAGAGAGACTTTATTACGTGAATGCCTTGGTGGAGGGAGCAGAATCATCATAACTTCTAGAGATCAACATATATTGAGGACACATGGAATTGATGAACTTTACCAAGTCCAACCGTTGAATAAGGAAGATGCTGTTGAGTTGTTTTGCAGAAATGCTTTCAAAAATAATTATATTATAAGTGGTTATGAAGACTTGACATACGATGTATTGTCACATGCTCAAGGTCATCCCTTGGCAATTCAAGTATTGGGCTCATCTTTGTTAGGCCAAAATGTCTCACAGTGGAGAAGTGCATTGGCTAGGCTAAGAAAAACTAAAAGTAAAAATATTATGGATGTGCTGCGAATAGGTTTTGATGAGCTTGAAGACATTGAGAAGGAAATATTTCTAGATATTGCTTGCTTTTTCAATGCTCCCAGTAAAGAGCAATCTGTGAAGGAAGTTCTAGATTTTCGTGGATTTCATCCTGAATATGGCCTACAAGTTCTCGTTGCAAAATCGCTCATCAGTATTTGCTTTGGATACATTTTTATGCATGGCTTATTGAAAGATTTGGGCTGGTTTATTGTTCGAGAAAAATCACCTATGAAGCCAAGAAAGTGGAGTAGGTTGTGGGATTGCCAAGATTTCCTCAAAGTTATGTCAGACAATATGGCAGCAGAAAATCTTGAAGCCATAGCTGTTCAACAGGAGTTTTGTGAAACAATAATAAAGGTCGATGCTTTATCAAAAATGAGTCACCTTAAGTTGCTCAAACTTTGGAATGTGAATTTTTCCGGAAGCCTCAATCATCTTTCCAATGAGTTAGGATATCTTACTTGGAATAATTATCCTTTTGAGTGTTTGCCTCCAAGTTTTCAGCCGGACAAACTTGTTCAGTTGTCCCTGATTGACAGCAACATCAAACAACTATGGAAAGACACAATGCCTCTGCACAATTTGAGACGTCTGAATCTCGCTTATTCCAAAAACCTAATAGAAATACCAGATTTAGGGGAGGCCCTAAATCTCGAGTGGCTAAATCTGAAAAGATGTATAAAACTCAAGCAGATCCATTCATCCATTGGTCTTCTAAGAAAGCTTACTTATGTGAATTTGGACGACTGCGAA 2199 0.3838 MCPPKTEQRVSPHQHLHLSLLCTFKVIITRIVHNKFAITMASNAIIQRTSSSSHVVRTYDVFVSFRGEDTRNNFTGFLFQALRRKGIDAFKDGQDLKKGDSIAPELLQAIQCSRIFIVVFSKNYASSTWCLRELAHIFNCIGTSSTHVLPIFYDVDPSEVRKQSGYFEKAFAEHEERFREDKEKMEEVQRWRHALTQVANLSGWDIRNKAQYAEIEQIVLKIINILGPKFLSLPNDDLVGMQSRFEELAKLLHLGSINDVRVVGISGMSGIGKSTVVGSLFERISHQYDCRCFIDDVSKIYRDFGTLGILKQLLSQCLNEKELKICNVYEGTCLVWNRLRNARALIVLDNVDQVGQLKMFTGSRETLLRECLGGGSRIIITSRDQHILRTHGIDELYQVQPLNKEDAVELFCRNAFKNNYIISGYEDLTYDVLSHAQGHPLAIQVLGSSLLGQNVSQWRSALARLRKTKSKNIMDVLRIGFDELEDIEKEIFLDIACFFNAPSKEQSVKEVLDFRGFHPEYGLQVLVAKSLISICFGYIFMHGLLKDLGWFIVREKSPMKPRKWSRLWDCQDFLKVMSDNMAAENLEAIAVQQEFCETIIKVDALSKMSHLKLLKLWNVNFSGSLNHLSNELGYLTWNNYPFECLPPSFQPDKLVQLSLIDSNIKQLWKDTMPLHNLRRLNLAYSKNLIEIPDLGEALNLEWLNLKRCIKLKQIHSSIGLLRKLTYVNLDDCE 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13416g00004 733 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 59 732 IPR044974 GO:0006952
Mupr13416g00004 733 Gene3D - 401 485 IPR042197 -
Mupr13416g00004 733 Gene3D - 232 394 IPR027417 -
Mupr13416g00004 733 Pfam NB-ARC domain 257 471 IPR002182 GO:0043531
Mupr13416g00004 733 FunFam Disease resistance protein (TIR-NBS-LRR class) 55 227 - -
Mupr13416g00004 733 Pfam TIR domain 59 210 IPR000157 GO:0007165
Mupr13416g00004 733 SUPERFAMILY Toll/Interleukin receptor TIR domain 49 204 IPR035897 -
Mupr13416g00004 733 SUPERFAMILY "Winged helix" DNA-binding domain 472 576 IPR036390 -
Mupr13416g00004 733 SUPERFAMILY L domain-like 600 732 - -
Mupr13416g00004 733 SMART till_3 58 201 IPR000157 GO:0007165
Mupr13416g00004 733 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 226 495 IPR027417 -
Mupr13416g00004 733 PRINTS Disease resistance protein signature 262 277 - -
Mupr13416g00004 733 PRINTS Disease resistance protein signature 436 450 - -
Mupr13416g00004 733 PRINTS Disease resistance protein signature 338 352 - -
Mupr13416g00004 733 PRINTS Disease resistance protein signature 672 688 - -
Mupr13416g00004 733 Gene3D - 56 229 IPR035897 -
Mupr13416g00004 733 Gene3D Ribonuclease Inhibitor 583 733 IPR032675 -
Mupr13416g00004 733 ProSiteProfiles TIR domain profile. 57 226 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13416g00004 Mupr-Chr13416 11699 16248 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13416g00004 239 732 WRKY Transcription Factor Family AT5G45050 33.141 4.54e-72 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13416g00004 - - gmx:100790778 944.88