Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13416g00001 GTACGAAAACAAAGTGGATATTTTGAGAAAGCCTTTGCCGAACACAAAGAAAGATTCAGAGAGGATAAAGAGAAGATGGAGGAAGTGCAGAGATGGAGACACGCTCTCACACAAGTGGCCAATATCTCTGGTTGGGACATCCAAAACGAGTCACAACCTGCAGTGATTGAACAAATTGTTGAAAGGATAAAAAATATAATTGGTCCCAAATTTTTAAGTCTTCCAAATGATAATCTAGTTGGGATGCAATCTCGCGTTGAAGAATTAGAAGAGCTTTTATGTTTGGATTCAGTTAATGAAGTTCGAGTTGTTGGAATTAGTGGGATGTCTGGAATAGGAAAGTCAACTGTTGCTCGTGCTTTATATGAAAAAATTGCCAATCTATATGATTATACTTGTTTTATTGATAATGTAAGCAAAATTCATCGACATTCTGGTCAACTTGGTGTACAAAGGCGGTTACTTTCTCCATCTTCGAAAGAAAATAATCTAGAGATTTGCAATTTTTCTGAGGGAACGTATTTGGTATGGAATAGGCTACACAATGCAAGAGCACTTGTAATTTTTGATAATGTTGATCAAATGGAACAGCTACAAATTTTTACAGGGAACAGAGACTCTATGTTACGTGAATGCCTTGGCGGAGGGAGCAGAATCATCATAATTTCTAGGGACGAACAAATATTGAAGTCGCATGGAGTAGATGATGTTTATCAAGTCCAACCATTGGATGATGAAGATGCTTATGAGTTGTTCTGCAAAAATGCTTTCAGAGGAATTGAAACAATTACAAGGGATTATGAAAATATGATGTATGATGTACTATCATATGTTAAAGGCCATCCCTTAGCCATCCAAGTATTGGGCTCATCTATGCTTAGACGAAGTGTCTCTCAATGGAAGAGTACATTGGCTAAGCTAAGAGAACATACAAATAAAGATATTATGAATGTGCTGCGACTAGGTTTTGATGAGTTGGACGACACAAATAAGGAAATATTTCTAGATATTGCTTGTTTTTTCAATAAATATGAAGTGCAAAAAGTAACAGAAATTCTAAATTTTCGTGGATTTCATCCTGAATGTGGTTTACAAGATCTCATTGATAAATCACTCATAACCATTGAGCTGAGTAGAATTTATATGCATAATTTGTTGAGGGATTTGGGCAGGTGTATTGTTAAAGAAAAATCACCTAATCAGCCAAGCAATTGGAGTAGGTTGTGGGAGTACAAAGATTTGCACAAAATTATGTCAAATAATATGGCAGCAGAAAATCTAGAAGCCATAGTTCTTGAGGGTGATGAATTCATAGATCCTGAAACAACAATGAAGGCAGATGGTTTTTCAAAAATGAGTCACCTTAAGTTGCTTGTGAGTTATTCTTTGAACTATTTCGGAAGCCTTGACTATCTTTCCAATGAATTAGGATATCTTAAATGGTCTCATTATCCTTTTGAGAGTATGCCTCCAAGTTTTCAGCCAGATAAACTTATTGACTTGTCCTTAGAGTACAACCGAGTCAAGCAACTATGGAAAGGCACAAAGCCTCTACACAATTTGAAACGTTTGAATCTTTCCTATTCTCAAAGTCTAATCAAGATGCCAGATTTAGGGGAGGCCATAAATCTTGAGTGCATAAATTTGGCAGTATGTACAAAAGTCAAGGAGATCGATCCATCTTTTGGTCTCCCAAAAAAACTTACTTCGGTGAATTTGCAAGACTGCAGAAGTCTTATCAAGTTGCCACATTTTCAAGAGACCTTGAATCTTGAGATACTAAATCTCGAAGGATGTATAAAACTCAAAAGTCTAATCAAGTTACCATATTTCAATGAGAACCTAAATCTTGAAATGCTAAATCTTGAAGGGTGTAGTCAACTTGAGGAAATTAATCCATCTATTGGTCTCCTAAGAAAGCTTATCTTTCTGAATTTGAAAGACTGTAAAAGTCTATTAAGCTTACCCAACAGCATATTGGGTCTCAATTCTCTCGAATATCTCAATCTCTCTGGCTGTTCAAAATTGTTTAATACCGAGTTATTAGGAGAAGCAAGGGACGGTGAAGCTCCTATTCATTCCCACACAACATTGTCCGTCATTAAATGGTTGTTGTATTCCAGAGCACATAAAGATTCAGATAGTTGTTTGTGGCCTTCCTCAACTACTTTCCCATGTATGCGTGAACTTGATCTAAGTTTCTGCAATTTAGTTCAAATTCCTGATGCTATTGGAAATTTAAGTTCCTTAGAAATACTAAAATTAAGTGGAAACAATTTTGCAACACTACCCGACCTCAAGGTGTGTTCCAAACTGTATTATTTAAACTTGCAAGATTGCAAGCAGTTGAAATATTTGCCTCAGCTCCCTTCACGAACTATCTTGCCATCAAAAGTTTACACACCGCCATCGTTGACTAAAGAATCAGAATTTGTATTTTGGGAATTCTGGTCATTTACGATGCCACCTCCAGCTTTTAGAGGAGTAACTTTAAATATTTTCAACTGCCCAAAAATAGTTGATAGGGAACGCACCACTAGCATGACTATTTCATGGATGATACAAATTGGTCAGGTGCACTGCAACATGCGTTATTGGCCCGATGTTTCATGGCTCAATGTTTCAAGTATTATTCCAGGAAGTGAAATACCAAGGTGGTTCAACAATCAGCATGTGGGCATCCACAGTTTATCGTCTCCTGTTATGCCTGACCATGGTTGCCTGGCTGTTCTGGCTTGTGTAGTTATTGAAACTCGATATGGGAAGGGAACAGTTTCAGCAATGTATCCTCCTAAATCGAAAGAAAGATATGATGGTATTGAAATTCCGGCAGTTCTCGCTAAAAATCTAGTCACGATCATATCAGATCACATGTGGTTAGTCTATTTGAGTCCATATGCATTCGCTGGACAATGGAGCTCACATTTACAAAGGAGAATTAATAGGATGGTCGGTGCAGTTTTTGATGTCAAGGTTGAGGTGAAGAAATATGGGTATCGATTTATTTATAAAGAGGATCTAGAACTATCAAACTTAACAATGGACAGTGGAAATTCGTCAGCTTGCAAGGACAAGTTTTTGGCACTTGAAGAAAACACAGAACAAGACTAA 3111 0.3703 VRKQSGYFEKAFAEHKERFREDKEKMEEVQRWRHALTQVANISGWDIQNESQPAVIEQIVERIKNIIGPKFLSLPNDNLVGMQSRVEELEELLCLDSVNEVRVVGISGMSGIGKSTVARALYEKIANLYDYTCFIDNVSKIHRHSGQLGVQRRLLSPSSKENNLEICNFSEGTYLVWNRLHNARALVIFDNVDQMEQLQIFTGNRDSMLRECLGGGSRIIIISRDEQILKSHGVDDVYQVQPLDDEDAYELFCKNAFRGIETITRDYENMMYDVLSYVKGHPLAIQVLGSSMLRRSVSQWKSTLAKLREHTNKDIMNVLRLGFDELDDTNKEIFLDIACFFNKYEVQKVTEILNFRGFHPECGLQDLIDKSLITIELSRIYMHNLLRDLGRCIVKEKSPNQPSNWSRLWEYKDLHKIMSNNMAAENLEAIVLEGDEFIDPETTMKADGFSKMSHLKLLVSYSLNYFGSLDYLSNELGYLKWSHYPFESMPPSFQPDKLIDLSLEYNRVKQLWKGTKPLHNLKRLNLSYSQSLIKMPDLGEAINLECINLAVCTKVKEIDPSFGLPKKLTSVNLQDCRSLIKLPHFQETLNLEILNLEGCIKLKSLIKLPYFNENLNLEMLNLEGCSQLEEINPSIGLLRKLIFLNLKDCKSLLSLPNSILGLNSLEYLNLSGCSKLFNTELLGEARDGEAPIHSHTTLSVIKWLLYSRAHKDSDSCLWPSSTTFPCMRELDLSFCNLVQIPDAIGNLSSLEILKLSGNNFATLPDLKVCSKLYYLNLQDCKQLKYLPQLPSRTILPSKVYTPPSLTKESEFVFWEFWSFTMPPPAFRGVTLNIFNCPKIVDRERTTSMTISWMIQIGQVHCNMRYWPDVSWLNVSSIIPGSEIPRWFNNQHVGIHSLSSPVMPDHGCLAVLACVVIETRYGKGTVSAMYPPKSKERYDGIEIPAVLAKNLVTIISDHMWLVYLSPYAFAGQWSSHLQRRINRMVGAVFDVKVEVKKYGYRFIYKEDLELSNLTMDSGNSSACKDKFLALEENTEQD 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13416g00001 1036 Gene3D Ribonuclease Inhibitor 409 594 IPR032675 -
Mupr13416g00001 1036 Gene3D - 1 72 IPR035897 -
Mupr13416g00001 1036 PRINTS Disease resistance protein signature 660 676 - -
Mupr13416g00001 1036 PRINTS Disease resistance protein signature 179 193 - -
Mupr13416g00001 1036 PRINTS Disease resistance protein signature 278 292 - -
Mupr13416g00001 1036 PRINTS Disease resistance protein signature 103 118 - -
Mupr13416g00001 1036 SUPERFAMILY L domain-like 382 794 - -
Mupr13416g00001 1036 Gene3D - 242 327 IPR042197 -
Mupr13416g00001 1036 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 607 IPR044974 GO:0006952
Mupr13416g00001 1036 Pfam NB-ARC domain 85 313 IPR002182 GO:0043531
Mupr13416g00001 1036 Gene3D Ribonuclease Inhibitor 595 683 IPR032675 -
Mupr13416g00001 1036 Gene3D Ribonuclease Inhibitor 710 892 IPR032675 -
Mupr13416g00001 1036 Gene3D - 73 236 IPR027417 -
Mupr13416g00001 1036 ProSiteProfiles Leucine-rich repeat profile. 749 770 IPR001611 GO:0005515
Mupr13416g00001 1036 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 337 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13416g00001 Mupr-Chr13416 25 5827 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13416g00001 27 753 WRKY Transcription Factor Family AT4G12020 30.067 3.55e-83 295