Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13400g00002 ATGGATTCCCCAATTTCATTTCAATCATCACCTAATAATCCTAACCAAATTTCAGAAATAGCATCACTCGTATCACACAAGAGGAAAGGAGGAAGAAAGAAGTTCCAGGAGACTCGGCACCCGATTTATAGGGGTGTTAGACAAAGGAAGGGAAAATGGGTTTGTGAACTTAGGGAACCAAAGAAGTCTACAAGGATTTGGTTAGGGACATACCCTACACCTGAAATGGCAGCTAGGGCACATGATGTGGGTGCCCTAGCCATTAGGGGCACTTCAGCTGTTCTAAACTTTCCCAACTCAGCTTTCTTGCTTCCAACTGTTAACTCATCTTCACCTAAAGATATTCGAGCAGCTGCAGTAGAAGCCGCTCAGATGTTCAGACCAATCTCTTCTTCCTTGTCCACTTCACACACACAAATTCCCAAACCTAAGTGTAAGAGAGTTAAAAAGGTTCCATCACAAGTGCAGGAAACAGTATTCGACTCGTCATTGAAGATCATGCACAATCTGGATGGTGAAATATGTGATGTTATCAACGGTGGCACAGAGATAAACAATTCCGATTTGTCTTCAACATTGTTCTTGGATGAAGAGGCATTGTTTAACATGCCCAGTCTCTTGGATAGAATGGCAGAGAGTTTGTGTCTTTTCCCACTACCATCACTGCATTATTGCCAGGAAGATGATCATGCTTATTGCACGGACTTCAATTATAACCTGTGGGGAATTTGA 732 0.4249 MDSPISFQSSPNNPNQISEIASLVSHKRKGGRKKFQETRHPIYRGVRQRKGKWVCELREPKKSTRIWLGTYPTPEMAARAHDVGALAIRGTSAVLNFPNSAFLLPTVNSSSPKDIRAAAVEAAQMFRPISSSLSTSHTQIPKPKCKRVKKVPSQVQETVFDSSLKIMHNLDGEICDVINGGTEINNSDLSSTLFLDEEALFNMPSLLDRMAESLCLFPLPSLHYCQEDDHAYCTDFNYNLWGI 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13400g00002 243 Pfam AP2 domain 41 90 IPR001471 GO:0003700|GO:0006355
Mupr13400g00002 243 PRINTS Ethylene responsive element binding protein signature 43 54 IPR001471 GO:0003700|GO:0006355
Mupr13400g00002 243 PRINTS Ethylene responsive element binding protein signature 64 80 IPR001471 GO:0003700|GO:0006355
Mupr13400g00002 243 SMART rav1_2 42 104 IPR001471 GO:0003700|GO:0006355
Mupr13400g00002 243 FunFam Ethylene-responsive transcription factor 2 41 99 - -
Mupr13400g00002 243 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 19 241 IPR045277 GO:0003700
Mupr13400g00002 243 SUPERFAMILY DNA-binding domain 42 100 IPR016177 GO:0003677
Mupr13400g00002 243 ProSiteProfiles AP2/ERF domain profile. 42 98 IPR001471 GO:0003700|GO:0006355
Mupr13400g00002 243 Gene3D AP2/ERF domain 42 99 IPR036955 GO:0003700|GO:0006355
Mupr13400g00002 243 CDD AP2 41 100 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13400g00002 Mupr-Chr13400 17899 18630 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13400g00002 27 224 AP2-EREBP Transcription Factor Family AT4G25470 46.231 1.79e-47 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr13400g00002 AP2 1.1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13400g00002 - - vum:124831015 322.398