Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13398g00001 ATGAGGATGGCTTGTTCAGTGCCTCTTCTTCTTCTTCTTCTGAGCTTCTCACTCCTGAGCCCAACATGTGTGTATGGTAATGATGAGCTTAGAGCCCTTTTGGAGTTGAAATCCAGTTTGGATCCTGAGGGGCATTTTCTGTCCTCATGGAGCATGGATGGCAACCCATGTGGTGGCTCCTTTGAGGGAGTGGCTTGCAATGAGAAGGGTCAGGTGGCCAATGTTTCCTTGCAGGGTAAGGGTCTCTCTGGGAGGCTTTCACCAGCCATTGCTGGACTCAAGCACTTGACAGGACTCTACTTGCACTACAACTCTTTGTATGGACAGATTCCAAGGGAAGTTGCTAGCTTGACTCACCTTACTGACTTGTACTTGAATGTCAATCATCTCTCTGGGGAAATCCCATCTCAGATTGGCAAGATGGAGAATCTTCAAGTTTTGCAGCTTTGCTATAATCAGTTAACAGGAAGCATACCTACACAGCTTAGTGAATTGAAAAGGCTCAGTGTTCTTGCTCTTCAGTCAAACCAGTTGGCTGGAGCTATCCCTGCTAGTCTAGGTGATTTGGAAATGTTGATAAGGCTAGATTTGAGCTCTAATAATCTCTTCGGTTCTATCCCCACTAAACTAGCTGATCTTCCTTCGCTGCAAGTTCTGGATGTTCACAACAATACTCTCTCTGGGAGTGTACCTCCTGCTCTGAAGAGACTAGAGGATGGATTTTTGTATGAACACAACATGGGGTTATGTGGAGTAGGGTTTTCATACTTGAAAGCCTGCACTGCTTCGGATCACAGCAATCTCACCCGGCCGGAACCTTATGGAGCTGGAGTTGGCAGTCTGTCTAGAGATATCCCCGAAACTGCTGATGTAAAGTTGCCTTGCAATACAACTCGGTGCCAAAATCCATCAAAATCCAAACATGCAACATCTATTACAGTTGGCATTGTTCTGGCTACAATTGCAATATCAGCAGTTGGTATTTTGACTTTCACTGTGTATCGTCGTCGGAAACAAAGGCTTGGAAGTGCATTTGATATCTCTGAAGGCCGTCTTAGTACAGATCAAGCCAAGGGTATATACAGGAAAAATGGATCTCCTTTGGTCAGCCTCGAGTACTCTAATGGATGGGACCCTTTGGCCGATAGCAGGAACTTCAATGGGGATAGACAAGACGAGTTCCAGAGTTTCAGGTTCAACTTGGAAGAAGTGGAGTCAGCTACTCAGTATTTCTCGGAGTTGAATTTGTTGGGTAAGAGCAACTTTAGTGCGACATATAAGGGAGTTTTAAGAGACGGATCTGTTGTTGCTGTCAAGAGCATCAGTAAAACTAGTTGCAAATCAGATGAATCTGAGTTTTTGAAGGGATTGAATGTTTTGACTTCGCTGAGGAATGAGAATTTAGTGAGGTTGAGAGGATTATGTTGTTCGAGGGGACGAGGTGAATGCTTCCTGGTGTATGATTTTGTTTCTAATGGAAATCTGACACGCTACCTTGATGTGAAGGAAGGTGATGGAGAAGTCCTCGAATGGTCAACTAGAGTTTCTATTGCAAAAGGGATTGCTAAAGGCATAGCATATTTACATGCATACAAAGCAAACAAACCAGGTCTTGTTCACCAAAACATCTCAGCCGAGAAAGTGCTCATTGATCAGCGATACAACCCGTTGCTGTCAGATTCTGGCCTGTACAAGCTTCTCACCAATGACATTGTCTTCTCTGCGCTGAAGGGCAGCGCAGCAAAGGGTTACCTGGCTCCAGAATACACCACTACCGGCCGGTTCACGGAGAAGAGTGATGTCTATGCATTTGGGGTGCTTCTTCTCCAGATCCTCACAGGGAAGCAGAAGATCACAAGCACAATGCGCCTTGCCGCCGAGTCCTTCAGATTCCCAGAATTCATTGACCCAAACCTGCACGACAGGTTCTTTGAACACGAAGCGGCTAAGCTAGCCAGAATGGCCTTACTTTGCTCCCATGAGTCTCCCTTTGAGAGGCCAAGCATGGAAGCCATTGTTCAAGAACTGGGGAATTGTAGTTGTGGAATGAATGGGGCTTCTTCGCCTTGTAGTGTTGCTTTTAAGAATGGTATAAAAACGAAATGA 2106 0.4544 MRMACSVPLLLLLLSFSLLSPTCVYGNDELRALLELKSSLDPEGHFLSSWSMDGNPCGGSFEGVACNEKGQVANVSLQGKGLSGRLSPAIAGLKHLTGLYLHYNSLYGQIPREVASLTHLTDLYLNVNHLSGEIPSQIGKMENLQVLQLCYNQLTGSIPTQLSELKRLSVLALQSNQLAGAIPASLGDLEMLIRLDLSSNNLFGSIPTKLADLPSLQVLDVHNNTLSGSVPPALKRLEDGFLYEHNMGLCGVGFSYLKACTASDHSNLTRPEPYGAGVGSLSRDIPETADVKLPCNTTRCQNPSKSKHATSITVGIVLATIAISAVGILTFTVYRRRKQRLGSAFDISEGRLSTDQAKGIYRKNGSPLVSLEYSNGWDPLADSRNFNGDRQDEFQSFRFNLEEVESATQYFSELNLLGKSNFSATYKGVLRDGSVVAVKSISKTSCKSDESEFLKGLNVLTSLRNENLVRLRGLCCSRGRGECFLVYDFVSNGNLTRYLDVKEGDGEVLEWSTRVSIAKGIAKGIAYLHAYKANKPGLVHQNISAEKVLIDQRYNPLLSDSGLYKLLTNDIVFSALKGSAAKGYLAPEYTTTGRFTEKSDVYAFGVLLLQILTGKQKITSTMRLAAESFRFPEFIDPNLHDRFFEHEAAKLARMALLCSHESPFERPSMEAIVQELGNCSCGMNGASSPCSVAFKNGIKTK 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13398g00001 701 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Mupr13398g00001 701 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 74 677 - -
Mupr13398g00001 701 FunFam Leucine-rich repeat receptor-like kinase 28 137 - -
Mupr13398g00001 701 ProSiteProfiles Protein kinase domain profile. 411 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr13398g00001 701 CDD STKc_IRAK 417 676 - -
Mupr13398g00001 701 Gene3D Ribonuclease Inhibitor 181 239 IPR032675 -
Mupr13398g00001 701 FunFam Protein NSP-INTERACTING KINASE 2 382 489 - -
Mupr13398g00001 701 Gene3D Ribonuclease Inhibitor 26 180 IPR032675 -
Mupr13398g00001 701 FunFam Protein NSP-INTERACTING KINASE 2 490 680 - -
Mupr13398g00001 701 Gene3D Phosphorylase Kinase; domain 1 381 489 - -
Mupr13398g00001 701 Gene3D Transferase(Phosphotransferase) domain 1 490 686 - -
Mupr13398g00001 701 Pfam Protein tyrosine and serine/threonine kinase 415 676 IPR001245 GO:0004672|GO:0006468
Mupr13398g00001 701 SUPERFAMILY Protein kinase-like (PK-like) 391 676 IPR011009 -
Mupr13398g00001 701 SUPERFAMILY L domain-like 24 236 - -
Mupr13398g00001 701 FunFam Protein NSP-INTERACTING KINASE 2 139 261 - -
Mupr13398g00001 701 Pfam Leucine rich repeat 167 226 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13398g00001 Mupr-Chr13398 4568 8180 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13398g00001 10 524 Miscellaneous Gene Families AT4G22730 54.649 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Mupr13398g00001 PK_Tyr_Ser-Thr 3.6e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13398g00001 - - gmx:100789253 1210.28