Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13397g00006 ATGGTAAACAAAGTGCTGAATTTGTCAATTGTTGTGAAGAAAAGAACTCGAAAATATTCCCAAGCCATTGATCCATATACACAAGCAATTGAGCTGAACAGTCAAAATGCAGTTTACTTTTCTAATCATGTCTTTGCCCATCTTCGGCTTGAGGAATATGGTAGTGCAATACATGATGCCACAGAGGCTATTGACATTGATCCTAAATATTCGAAGGGTTATTACAGGTGGGGTGCTGCTCATCTTGGACTGGGAAAATTCAAGGAAGCACTGAAAGATTTTCAGCAGTTATCATTTGTCGACGTTCTTTTGAGGCCGAGAAAGTTTGCAATCAAGACCTTTATTGAATATGTTGGAGAACCCAAGACCCACTTGGAATCTACTGCATCCTCTGTGTATAGGCCAACAATATTGCCGGCTCAAACAATTAGAACTGTTTTTCACACCTACGATTATGCAAGACATTTTATTAGTGCTTGTACCCTCATCCTTGGACTTGAGAGTACACCTTTTGGGGTTGAGTATCAAGGGGAGTTGCCGCAGTACGTGCTACGAAATTTGTCTGCAAGCTAA 573 0.4066 MVNKVLNLSIVVKKRTRKYSQAIDPYTQAIELNSQNAVYFSNHVFAHLRLEEYGSAIHDATEAIDIDPKYSKGYYRWGAAHLGLGKFKEALKDFQQLSFVDVLLRPRKFAIKTFIEYVGEPKTHLESTASSVYRPTILPAQTIRTVFHTYDYARHFISACTLILGLESTPFGVEYQGELPQYVLRNLSAS 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13397g00006 190 Gene3D Tetratricopeptide repeat domain 9 111 IPR011990 GO:0005515
Mupr13397g00006 190 PANTHER LD24721P 17 96 IPR047150 -
Mupr13397g00006 190 Gene3D Glycogen Phosphorylase B; 141 182 - -
Mupr13397g00006 190 SMART tpr_5 37 70 IPR019734 GO:0005515
Mupr13397g00006 190 SMART tpr_5 3 36 IPR019734 GO:0005515
Mupr13397g00006 190 SMART tpr_5 71 104 IPR019734 GO:0005515
Mupr13397g00006 190 SUPERFAMILY TPR-like 17 96 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13397g00006 Mupr-Chr13397 21833 25994 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13397g00006 109 179 Trehalose Biosynthesis Gene Families AT1G78580 45.122 1.39e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13397g00006 K04460 - gmx:100806083 149.058