Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13393g00001 ATGAAAAATGAAGCATTGAAGAGTTTAAAAGAAGGATTCCAAGGTGCAAACAACACTGGCCTATGTGGAGATGGGTTTTCTACTTTGAAAGCTTGCAACAAAGATAAAATATTTGACGTTGACCAGATTAGTGCCCCAAATGTGTCCATAAACAGAAATCATCCAATAAATCTCCCGAAGCCTGCAAATACCCAGTGGCATTGTAACCAGACCCATTGCTCAAAATCAAGAAGGTTTCTTCATGTTGTCATTGCAGCAAGTGCAATAGCTACCACTATCACATTCATAGGTTTTGGAATATTCATATTTGTCAGATATCGCGGCCAAAGGCAGAGGGTTAGGAACACATCAGATTGTTCTGAAGGTCAACTTAGTCCTTACCAGCCTAAAGAGTTCCATAGAAGAAGTCCATCTCCACTTGTTAATCTTGAGTATTATTATAAAGGTTGGGATTCATTTGATGGTCAAAATGCCAGTGAATTATCCCATGAATATTTGAACCGTTTTAGATTTAATATCGATGAGATTGAATCAGCAACTCAGTACCTTTCTGAGGCCAACTTATTGGGTAAGAGCAAATTCTCAGCAGTCTATAAAGGAGTTCTTAGAGATGGTTCTCTTGTGGCTATTAGAAGCATTAGCGTGACTTGCTGCAAAACCGAGGAAGGTGAATTTGTGAAGGGGTTGAGCCTATTAACCACACTGAGACATGAAAACATTGTTAAGATGAGAGGTTTCTGTTACTCGAGGAGTAGAGGTGAATGGTTTTTTGTCTATGACTTTGCCACCAGGGGTAATCTGTCTCAATTTGTTGACAAGGAAGATGGAAGTGACTATGTACTTGAATGGTCCAAGAGAGTTTCTATCATCAGGGGTATTGCTAAAGGTATTGGATATTTGCACAGCAATGAAGCAAGCAAGCCTACAATAGTACACCAAAACATTTCAGTTGAAAAAGTTATTCTAGATCATCAATTTAACCCCTTGATCATGGATGCCGGACTCCCTAAGCTTCTTGCAGATGATGTTGTGTTCTCAGCTCTTAAAGTAAGTGCTGCCATGGGATACCTAGCTCCTGAATATATTACTACTGGACGCTTTACAGAGAAGAGTGACATATATGCATTTGGGGTTATTGTTCTCCAAGTTCTATCTGGAAAGACATTGATAGGGGGTTCAATCCGGGTGGCAGTTGAATCATTCAGATTTGAAGATTTTGTTGACACAAATCTGAAGGGAGATTATTCTAAATCTGAAGCCGCAATTCTTTCAAAGCTTGCAATTGTGTGTACCCATGAACTGCCCGAGCAAAGGCCAACCATGGTGGAGGTGATTCAAGAGCTCACCATGCTTCCTGCCCATTCTTCACAATCTACCACTTTCTAG 1386 0.4019 MKNEALKSLKEGFQGANNTGLCGDGFSTLKACNKDKIFDVDQISAPNVSINRNHPINLPKPANTQWHCNQTHCSKSRRFLHVVIAASAIATTITFIGFGIFIFVRYRGQRQRVRNTSDCSEGQLSPYQPKEFHRRSPSPLVNLEYYYKGWDSFDGQNASELSHEYLNRFRFNIDEIESATQYLSEANLLGKSKFSAVYKGVLRDGSLVAIRSISVTCCKTEEGEFVKGLSLLTTLRHENIVKMRGFCYSRSRGEWFFVYDFATRGNLSQFVDKEDGSDYVLEWSKRVSIIRGIAKGIGYLHSNEASKPTIVHQNISVEKVILDHQFNPLIMDAGLPKLLADDVVFSALKVSAAMGYLAPEYITTGRFTEKSDIYAFGVIVLQVLSGKTLIGGSIRVAVESFRFEDFVDTNLKGDYSKSEAAILSKLAIVCTHELPEQRPTMVEVIQELTMLPAHSSQSTTF 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13393g00001 461 FunFam Protein NSP-INTERACTING KINASE 2 262 452 - -
Mupr13393g00001 461 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 57 450 - -
Mupr13393g00001 461 FunFam Protein NSP-INTERACTING KINASE 2 154 261 - -
Mupr13393g00001 461 Gene3D Transferase(Phosphotransferase) domain 1 263 457 - -
Mupr13393g00001 461 Pfam Protein tyrosine and serine/threonine kinase 187 448 IPR001245 GO:0004672|GO:0006468
Mupr13393g00001 461 ProSiteProfiles Protein kinase domain profile. 183 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr13393g00001 461 SUPERFAMILY Protein kinase-like (PK-like) 158 452 IPR011009 -
Mupr13393g00001 461 Gene3D Phosphorylase Kinase; domain 1 151 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13393g00001 Mupr-Chr13393 1554 3359 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13393g00001 5 296 Miscellaneous Gene Families AT4G22730 50.495 2.23e-90 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Mupr13393g00001 PK_Tyr_Ser-Thr 1.9e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13393g00001 - - gmx:100784155 747.658