Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13392g00001 ATGTGTGGAGGTGCTATTATCTCCGACTTCATTCCGGCGGGGCCCGCCGGAGGGGCCCGGCGCGTGACCGCCGATATCCTGTGGCCCAATTTGAATAGGCCCGGGTTGGCGAAGCGGTTGTCGAAGCCGCTGCTGGACGATGACTTCGAGGCCCGCTTCAGAGAGTTCAAGGATGACTCGGAAATCGAGGAGGACGAGAACGAAGAGGACGAGGACTCGATGATGGTCGGTGTCAAGAAGCCCTTTGCCCTTTCTCGCTCCAACAAGTCTTCTAAGCCTCTCTCTCGTGGATCAACAACTGTAAAATCTGCAGAATTGAAGGGGCAAGCTGAGAAGTGTGCCAAGAGAAAGAGGAAGAACCAATATAGGGGAATCCGACAGCGTCCATGGGGAAAGTGGGCAGCTGAGATCCGGGACCCAAGAAAGGGGGTTCGTGTTTGGCTGGGAACTTTCAGCACTGCTGAAGAAGCTGCGAGGGCATACGATACTGAAGCAAGGAGGATTCGTGGCAACAAAGCCAAGGTGAATTTCCCCGACGAGGCTTCAAGTGCTTCCTCAAAACGATTGAAGGCGAATCCAGAGCCATCAAAGGAAAATCTCAACTCTTTGAAGCCAAAAATGAACCAGATGTTCAATTTCAGCAACGATCTGGAGGTGGAACAGAAGCCAGTGGTTAACCAGTATGCTAACACCGGCCTGTTCTCTGGAAACGTAGTTCCAGTCTCACCTGTTACTCCATCTGCTGATGTTACTGCTTATTTCAGTTCCGAGCATTCAAGCAATTCTTTTGATTATTCTGACCTTGGATGGGGTGAACAAGTCCCTAAATCTCCTGAGATCCCATCAGTGCTTTCTGCTGCTCCTGTGGAGGGTGAATCAAAGTTTGCCGATCAGAAGAAAAACAACTCACAGGATGTGATGACTGTGCAAGATGGTTCAGCAAAGACACTGTCTGAGGAGCTTGCAGACATTGAATCTCAGCTCAAGTTCTTCGACACCCCTTATGTTGATGGAGTCTGGGATGATGCTTCAATGGCGTCATTGCTCAGTGGTGATGTGCTGGACCTTTGGAGCTTCGAGGACCTTCCTTCTGTGGCAGGAGTTTTCTAA 1110 0.5054 MCGGAIISDFIPAGPAGGARRVTADILWPNLNRPGLAKRLSKPLLDDDFEARFREFKDDSEIEEDENEEDEDSMMVGVKKPFALSRSNKSSKPLSRGSTTVKSAELKGQAEKCAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFSTAEEAARAYDTEARRIRGNKAKVNFPDEASSASSKRLKANPEPSKENLNSLKPKMNQMFNFSNDLEVEQKPVVNQYANTGLFSGNVVPVSPVTPSADVTAYFSSEHSSNSFDYSDLGWGEQVPKSPEIPSVLSAAPVEGESKFADQKKNNSQDVMTVQDGSAKTLSEELADIESQLKFFDTPYVDGVWDDASMASLLSGDVLDLWSFEDLPSVAGVF 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13392g00001 369 PANTHER DNA-BINDING DOMAIN 80 318 IPR044808 GO:0003700|GO:0009873
Mupr13392g00001 369 ProSiteProfiles AP2/ERF domain profile. 121 178 IPR001471 GO:0003700|GO:0006355
Mupr13392g00001 369 MobiDBLite consensus disorder prediction 56 125 - -
Mupr13392g00001 369 CDD AP2 121 179 IPR001471 GO:0003700|GO:0006355
Mupr13392g00001 369 MobiDBLite consensus disorder prediction 178 202 - -
Mupr13392g00001 369 SMART rav1_2 121 184 IPR001471 GO:0003700|GO:0006355
Mupr13392g00001 369 SUPERFAMILY DNA-binding domain 121 180 IPR016177 GO:0003677
Mupr13392g00001 369 PRINTS Ethylene responsive element binding protein signature 144 160 IPR001471 GO:0003700|GO:0006355
Mupr13392g00001 369 PRINTS Ethylene responsive element binding protein signature 122 133 IPR001471 GO:0003700|GO:0006355
Mupr13392g00001 369 MobiDBLite consensus disorder prediction 176 202 - -
Mupr13392g00001 369 MobiDBLite consensus disorder prediction 84 105 - -
Mupr13392g00001 369 Pfam AP2 domain 121 170 IPR001471 GO:0003700|GO:0006355
Mupr13392g00001 369 Gene3D AP2/ERF domain 120 179 IPR036955 GO:0003700|GO:0006355
Mupr13392g00001 369 FunFam Ethylene-responsive transcription factor 2 120 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13392g00001 Mupr-Chr13392 8530 11047 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13392g00001 1 369 AP2-EREBP Transcription Factor Family AT1G53910 38.384 2.46e-54 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mupr13392g00001 AP2 7e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13392g00001 K09286 - gmx:100818646 535.028