Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13388g00002 ATGGCTCAAGTACAAAGTGGCCAAGGCAGTGAAGGGATTAAGCTGTTTGGGACAACGATTACGTTGTGTGGTAGAGAAAGAAAGGAAGATAAAAAGGGAACAGAGGAGAAGAGGCCTGAAAAGATCATAGCATGTCCAAGATGCAAGAGCATGGAAACCAAGTTCTGCTACTTCAATAACTACAACGTTAATCAGCCTAGACATTTCTGCAAGGCCTGCCAGAGGTACTGGACTGCTGGTGGAGCCCTTCGCAACGTACCAGTTGGAGCTGGCCGACGAAAGGCCAAATTATCAGGTCATGATACCACTGCATTTTTCGACGGTGGACTCCAACACTTTAGTTTCGATGAATGCCATGCTGCTACCGTCGCTCATGGTGACTTCCGGCAGCTTTTTTCGTCTAAAAGGAGAAGGACAAGCTCAGGTGGTCAACAATTGCTTGTTACTGCAGCTCAGCATGAAAGTCAAAAAAAGTTAGTTATCATCAACGAAATCACAGAACATCCGAATCAGATACAAACAAAGGAAGAGGCTTGA 537 0.4544 MAQVQSGQGSEGIKLFGTTITLCGRERKEDKKGTEEKRPEKIIACPRCKSMETKFCYFNNYNVNQPRHFCKACQRYWTAGGALRNVPVGAGRRKAKLSGHDTTAFFDGGLQHFSFDECHAATVAHGDFRQLFSSKRRRTSSGGQQLLVTAAQHESQKKLVIINEITEHPNQIQTKEEA 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13388g00002 178 PANTHER CYCLIC DOF FACTOR 2 29 145 IPR045174 GO:0003700|GO:0006355
Mupr13388g00002 178 Pfam Dof domain, zinc finger 41 96 IPR003851 GO:0003677|GO:0006355
Mupr13388g00002 178 ProSitePatterns Zinc finger Dof-type signature. 45 81 IPR003851 GO:0003677|GO:0006355
Mupr13388g00002 178 ProSiteProfiles Zinc finger Dof-type profile. 43 97 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13388g00002 Mupr-Chr13388 11564 12721 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13388g00002 8 144 C2C2-Dof Transcription Factor Family AT2G34140 53.333 2.17e-51 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mupr13388g00002 zf-Dof 1.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13388g00002 - - gmx:100527802 247.669