Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13378g00002 ATGGAGAAAAATAAGGTGGTCATGCTAATTGTGTGCTGTTTATCCTTTTGCTTCTTCAAGCACACATTCTCTAAACAGGAAATTGTCACCATTACTCCAAATCATTCTATCCAATATGATGACACCCTTGTTTCTGCATCTGGAACCTTTGAGGCAGGATTCTTCAGCTTTGGAAGCCCACAACGCCAATACTTTGGTATAAGGTACAAGAGCATATCACCTGGGACTATTGTGTGGGTTGCCAACAGAGATACTCCAGTACAAAATTCAACTATAGTTCTAAAACTAACTGATCAAGGGGCTCTTGTCATCATTGATGGCTTAAAGGGCCAAATCTGGTCCTCCAACTCATCAACAATTGCAAGGAACCCAGTTGTGCAGCTTCTAGACTCAGGAAACCTTGTTGTAAAAGATGGAGTCAACTCAGTGAACTTCTTGTGGCAAAGCTTTGATTACCCTGGCGACACTTTCCTTGCAGGAATGAAGCTGGAAAGCAATTTAAAAAAGAGTCCATATAGGTCTCTCACTTCTTGGAGAGACCTTGAAGACCCTGCTCAAGGTGACTTTTCTTTTCACATAGATATTCATGGCCTTCCTCAACTAGTTGTTACAAAGGGAGGAACTTTAATTAATAGAGCAGGGCCATGGAATGGTTATCTTTTTAGTGGAGCTTCTTGGCTAAGAATGCACAGATTCTTGAATGTCACTTTTGTTCTAACTGACAAAGAAGCCTATTATGAGTTTGAGAGCTCAGGGCCTTCTAGAGCAGTGATCCATCCAACCGGAGTTTCAGAAGTTTTACTGTGGTCAGATCAGAAACAAAGTTGGGAGATTATGTCTACTCGTCCAATGGACCAGTGTGAATATTATGGCTTGTGTGGTGCTAATTCTAATTGCAGAATCAATGGAAACCCATTATGTAAATGCTTGGAAGGTTTCACACCCAAATTTCAAGCAAAATGGGATTCTTTGGATTGGTCTGGTGGGTGTGTCAGAAGAATGAACTTGAATTGTGATGGTGGAGATGGGTTTCTCAAATATGCAGGAATGAAGTTGCCAGACACATCTTCTTCCAGGTTTGACAAGAGTTTGAGCCTTGAGGAATGTAAGACAATGTGTTTGAAAAATTGTTCATGCTCAGCATGTGCAAACTTAGATATGAGAGGTGGTGGAAGTGGCTGCGTGCTTTGGTTTGATGACATTTTGGACTTGAGAGTACACACTGACCAAGGACAAGATGTTTACATACGATTGACATTGTCAGAACTAGTCAGACATAACCAAAACATATCAACTTCAGAATTTGATCATATAAAAAATAAGGGGAAGTTTACTAAAAAGAAGCTTGCAGGGATTGTAGTAGGCATTACCACATTCACTATAGGCCTGACAATCCTTCGATTGGCCATGAAAGCATTTGTACAGAGAAAAAAGAGGACAGGGATTATAGACAAAATAATTCACAGGAGGGGCAAGAGAGGAAAAGAAGACATTGACTTACCGACAATATTTGACTTTTCAACCATCTCTCATGCCACAAATCACTTTTCAAACAGTAACAAGTTAGGAGAAGGAGGATTTGGGTCAGTCTATAAGGGTGTATTGGCAGATGGGCAGGAGATGGCTGTCAAGAGATTATCTGAAACTTCTGCACAAGGAACAGAAGAGTTCAAAAATGAAATAATGTTGATGGAAACACTTCAGCACCGTAATCTTGTAAAACTTCTTGGTTGTTCTATTCAACACAATGAAAAGTTGTTGATCTATGAATTCATGCCTAACAGAAGCTTGGATTATTTTATTTTTGATTCAACGCGAAGTAAACTGCTAGATTGGACTAAGCGCTTTCGAATTATTGATGGAATTGCTCGAGGGCTTCTTTATCTTCATCAAGACTCTAGATTAAGAATCATTCATAGAGATATTAAAGCTAGCAACATTCTTCTAGATACGGACATGAATCCAAAAATATCAGATTTTGGTTTGGCTAAAATATTTGGAGGAGATCAAGCTGAGGCCAATACTAAAAGAATCATGGGAACATATGGTTATATGTCTCCAGAGTATGCAGTACGTGGATCTTTTTCAATCAAATCTGACATTTTTAGCTTTGGTGTCATTGTACTCGAGATAATCAGCGGAAGGAAGAATCGTGACTTTTGTGACCCTAATCATCATCTTAATCTTCTTGGTCATGCATGGAGACTATGGGTAGAAGAAAGGGCACTAGAATTAGTGGATGACAATTTAGTTGATGTGGCTACCTCGTCAGAAATACTGCGATGTATTCATGTTGGTCTTTTATGTGTACAACATAGACCCGAAAATAGGCCTAGCATGTCATCTGTAATTTTAATGCTGAATGGTGGAAAGTTATTCCCTGAACCAGGCCAACCTGGGTTCTATACAGAAAGAGATTCCCGGAGACCATCTGCAGAGCATTCTCTAAATCATGTTTCGATCTCAATGTTAGAGGCG 2478 0.3959 MEKNKVVMLIVCCLSFCFFKHTFSKQEIVTITPNHSIQYDDTLVSASGTFEAGFFSFGSPQRQYFGIRYKSISPGTIVWVANRDTPVQNSTIVLKLTDQGALVIIDGLKGQIWSSNSSTIARNPVVQLLDSGNLVVKDGVNSVNFLWQSFDYPGDTFLAGMKLESNLKKSPYRSLTSWRDLEDPAQGDFSFHIDIHGLPQLVVTKGGTLINRAGPWNGYLFSGASWLRMHRFLNVTFVLTDKEAYYEFESSGPSRAVIHPTGVSEVLLWSDQKQSWEIMSTRPMDQCEYYGLCGANSNCRINGNPLCKCLEGFTPKFQAKWDSLDWSGGCVRRMNLNCDGGDGFLKYAGMKLPDTSSSRFDKSLSLEECKTMCLKNCSCSACANLDMRGGGSGCVLWFDDILDLRVHTDQGQDVYIRLTLSELVRHNQNISTSEFDHIKNKGKFTKKKLAGIVVGITTFTIGLTILRLAMKAFVQRKKRTGIIDKIIHRRGKRGKEDIDLPTIFDFSTISHATNHFSNSNKLGEGGFGSVYKGVLADGQEMAVKRLSETSAQGTEEFKNEIMLMETLQHRNLVKLLGCSIQHNEKLLIYEFMPNRSLDYFIFDSTRSKLLDWTKRFRIIDGIARGLLYLHQDSRLRIIHRDIKASNILLDTDMNPKISDFGLAKIFGGDQAEANTKRIMGTYGYMSPEYAVRGSFSIKSDIFSFGVIVLEIISGRKNRDFCDPNHHLNLLGHAWRLWVEERALELVDDNLVDVATSSEILRCIHVGLLCVQHRPENRPSMSSVILMLNGGKLFPEPGQPGFYTERDSRRPSAEHSLNHVSISMLEA 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13378g00002 826 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 337 418 - -
Mupr13378g00002 826 CDD STKc_IRAK 522 789 - -
Mupr13378g00002 826 CDD B_lectin 42 153 IPR001480 -
Mupr13378g00002 826 ProSiteProfiles Protein kinase domain profile. 516 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr13378g00002 826 Pfam PAN-like domain 338 404 IPR003609 -
Mupr13378g00002 826 SMART blect_4 34 153 IPR001480 -
Mupr13378g00002 826 Pfam D-mannose binding lectin 76 179 IPR001480 -
Mupr13378g00002 826 Pfam S-locus glycoprotein domain 212 317 IPR000858 GO:0048544
Mupr13378g00002 826 SMART ntp_6 339 418 IPR003609 -
Mupr13378g00002 826 Gene3D Hepatocyte Growth Factor 334 420 - -
Mupr13378g00002 826 CDD PAN_AP_plant 335 418 - -
Mupr13378g00002 826 Gene3D - 22 150 IPR036426 -
Mupr13378g00002 826 ProSitePatterns Protein kinases ATP-binding region signature. 522 544 IPR017441 GO:0005524
Mupr13378g00002 826 SMART serkin_6 516 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr13378g00002 826 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 150 - -
Mupr13378g00002 826 Gene3D Phosphorylase Kinase; domain 1 487 591 - -
Mupr13378g00002 826 ProSiteProfiles Bulb-type lectin domain profile. 28 149 IPR001480 -
Mupr13378g00002 826 Gene3D Transferase(Phosphotransferase) domain 1 592 792 - -
Mupr13378g00002 826 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 480 591 - -
Mupr13378g00002 826 ProSitePatterns Serine/Threonine protein kinases active-site signature. 637 649 IPR008271 GO:0004672|GO:0006468
Mupr13378g00002 826 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 183 IPR036426 -
Mupr13378g00002 826 ProSiteProfiles PAN/Apple domain profile. 338 419 IPR003609 -
Mupr13378g00002 826 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 592 794 - -
Mupr13378g00002 826 SUPERFAMILY Protein kinase-like (PK-like) 500 787 IPR011009 -
Mupr13378g00002 826 Pfam Protein tyrosine and serine/threonine kinase 519 784 IPR001245 GO:0004672|GO:0006468
Mupr13378g00002 826 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 10 774 - -
Mupr13378g00002 826 PIRSF SRK 2 826 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13378g00002 Mupr-Chr13378 13601 17029 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13378g00002 452 801 Receptor kinase-like Gene Family AT4G23230 53.693 6.61e-128 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr13378g00002 PK_Tyr_Ser-Thr 4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13378g00002 - - gmx:100819820 1108.98