Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1336g00002 TCTTACCTTATGGCTCCTCTCTTCGTCTCGCTGCAAATGCTTCTGGCTTTCAGTTGCATATTGCATGCAACAACTGTGTCATGCACAACCTACCATGACACCACTCCCAAAATAGTGTCTTCCAAGTGGGTTGGACCCATCGGACACCGAGTTATCACCGTTGATCTTCACGGCGGTGGCCATTTCCGATCAGTCCAAGCCGCCGTCAATGCTGTCCCGGAGAACAACAGAATGAATGTCCTTATTCAAATCAGCGCTGGATATTATATAGAGAAGGTAGTGGTGCCCGTGACAAAGCAGTACATTACATTTGAGGGCGCGGGAAGAGATGTGACGGTGATAGAATGGCATGATCGAGCCAGTGATCCTGGTCCCAACGGCCAACAACTTCGTACTTATAGAACAGCATCTGTTACTGTTTTTGCCAACTATTTCTCTGCCAGGAATATCAGCTTCAAGGAAATGGTGCAGAACACAGCGCCGGCGCCGATGCCGGGAATGGAAGGGTGGCAAGCGGCGGCGTTTCGCATATCCGGGGACAAAGCCTATTTTTCCGGCTGTGGCTTCTACGGTGCACAAGACACTCTTTGCGACGACGCTGGTCGCCATTATTTCAAAGAATGTTACATCCAGGGCTCCATAGATTTCATTTTTGGGAATGGAAGGTCCATGTACAAGGATTGCACGCTACACTCAATAGCAACGAGGTTCGGGTCAATAGCAGCCCAAGATAGGAAATCCCGAAACGAGAAGACGGGCTTCGCATTTGTACGGTGCAAGGTAACGGGAACAGGCCGGATTTACGTAGGCCGTGCAATGGGCCAGTACTCTAGGATTGTCTATGCCTACACCTACTTCGACGACATTGTTGCACATGGTGGTTGGGATGATTGGAACACTGCCAACAACAATAACAAGACTGTGTTCTTTGGAGTGTACAAATGCTGGGGACCTGGCGCAGCGGCTATACGTGGAGTCCCATTGGCCCAAGAGCTAGATTTCGAGTCTGCCCATCCATTCCTGGTCAAGAGTTTTGTCAACGGTAGACATTGGATTGCACCCTCTGATGCTTAG 1074 0.4991 SYLMAPLFVSLQMLLAFSCILHATTVSCTTYHDTTPKIVSSKWVGPIGHRVITVDLHGGGHFRSVQAAVNAVPENNRMNVLIQISAGYYIEKVVVPVTKQYITFEGAGRDVTVIEWHDRASDPGPNGQQLRTYRTASVTVFANYFSARNISFKEMVQNTAPAPMPGMEGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIQGSIDFIFGNGRSMYKDCTLHSIATRFGSIAAQDRKSRNEKTGFAFVRCKVTGTGRIYVGRAMGQYSRIVYAYTYFDDIVAHGGWDDWNTANNNNKTVFFGVYKCWGPGAAAIRGVPLAQELDFESAHPFLVKSFVNGRHWIAPSDA 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1336g00002 357 ProSitePatterns Pectinesterase signature 2. 210 219 IPR033131 -
Mupr1336g00002 357 FunFam Pectinesterase 47 354 - -
Mupr1336g00002 357 SUPERFAMILY Pectin lyase-like 49 354 IPR011050 -
Mupr1336g00002 357 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 48 353 - -
Mupr1336g00002 357 Gene3D - 48 356 IPR012334 -
Mupr1336g00002 357 Pfam Pectinesterase 52 348 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1336g00002 Mupr-Chr1336 34443 37494 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1336g00002 9 357 Carbohydrate Esterase AT5G47500 70.538 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1336g00002 - - gmx:100796327 649.047