Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13368g00002 ATGATTTTGATGCACACTATCCAGCAAAAGAGGAATCGAAGTCTAAAACTACTCAACATACTAGATATGAGGAACCCGGTTTTTGTCATTGTTGTTGATATTGGACTACTTGACTTGAGCACAGATATATGGAAGGAACAGCTTAACTTCCTTCACAGGTACTTTGGTAGAGCAAAGTTTGTGTGGATGCTAAATCATGACACGTCCAATACCATAAAGATGGAGCTCCGAAGGAAAGGGCATATACTGATGGTCAACAAACCCCTCTACAAAGCAAAAATGATTCACATTTTGGAAGCTGTCATAAAGGAGAGAAATCTTGAGCTACCAAAGAAAAACATGACTGCTCCAAGGACCACAATGAAAGAGGGTGATTTGCACGAGTTTCTTGAGATTGATTCTACTCATTTTGATGCTGCTAGCTCTGATGATTCTGACATATCAGAAATAGGTGGTTCTAATCCTGTTATTACTAATGAAGATAAACCAATTGAAAAGGTAGCCAAATCCCATCCGTCATCACCATACCATGAGAGTAACTGCAATGAAAATGAATACTTGGAAGAACATAATTTGAGGAAAGAGGAATCTTCTAGCCCCAGCTCCAATTATGCCACTGAAGACAACCAACCTAAATCACTGCCCACCAAAGAATCATCCATTTTAACAGAGGATCAGGATGAAGATTCTGAATGTGGGGAAACACATAGGGTGACCAGCTCAAGTAAAGCAGTTGATGGAAAGAAATCTCTTGAGGGCCTAAAGATTTTGCTTGCAGAAGATACACCAGTACTTCAAAGGGTTGCAACCATAATGCTTGAAAAAATGGGAGCAGATGTTGTTGCTGTAGGTGATGGACAACAGGCAGTAGATGCTCTCAATTGCATGTTCACTGCTGAAGATTGCAGAAGGGAATCACTCCAGAAGGAAAGAAACACAAGATCTCAAACAGAGATTTTGACTTGCCGTCCATATGACTTGATCCTAATGGATTGTCAGATGCCAAAGATGGATGGCTACGAGGCAACAAAAGCAATTAGGAAATCAGAAGTGGGAACAAGCTTGCACATTCCCATTGTTGCTCTTACAGCACATGCAATGTCATGTGATGAAGCCAAATGCCTGGAGGTGGGCATGGATGCATATTTAACAAAGCCAATTGACTTCAAGTTGATGGTGTCCACCATTCTTTCACTCACTAAAAGAACATCTTGA 1215 0.4066 MILMHTIQQKRNRSLKLLNILDMRNPVFVIVVDIGLLDLSTDIWKEQLNFLHRYFGRAKFVWMLNHDTSNTIKMELRRKGHILMVNKPLYKAKMIHILEAVIKERNLELPKKNMTAPRTTMKEGDLHEFLEIDSTHFDAASSDDSDISEIGGSNPVITNEDKPIEKVAKSHPSSPYHESNCNENEYLEEHNLRKEESSSPSSNYATEDNQPKSLPTKESSILTEDQDEDSECGETHRVTSSSKAVDGKKSLEGLKILLAEDTPVLQRVATIMLEKMGADVVAVGDGQQAVDALNCMFTAEDCRRESLQKERNTRSQTEILTCRPYDLILMDCQMPKMDGYEATKAIRKSEVGTSLHIPIVALTAHAMSCDEAKCLEVGMDAYLTKPIDFKLMVSTILSLTKRTS 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13368g00002 404 MobiDBLite consensus disorder prediction 188 245 - -
Mupr13368g00002 404 ProSiteProfiles Response regulatory domain profile. 255 400 IPR001789 GO:0000160
Mupr13368g00002 404 Pfam Response regulator receiver domain 256 395 IPR001789 GO:0000160
Mupr13368g00002 404 MobiDBLite consensus disorder prediction 197 220 - -
Mupr13368g00002 404 MobiDBLite consensus disorder prediction 140 162 - -
Mupr13368g00002 404 PANTHER HYBRID SIGNAL TRANSDUCTION HISTIDINE KINASE J 41 401 - -
Mupr13368g00002 404 CDD REC_hyHK_CKI1_RcsC-like 256 396 - -
Mupr13368g00002 404 SUPERFAMILY CheY-like 252 401 IPR011006 -
Mupr13368g00002 404 Gene3D - 233 402 - -
Mupr13368g00002 404 SMART REC_2 254 396 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13368g00002 Mupr-Chr13368 9272 10803 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13368g00002 16 401 Histidine Kinase Gene Family AT2G17820 55.303 4.81e-120 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mupr13368g00002 Response_reg 6.7e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13368g00002 - - gmx:100814068 693.345