Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13366g00002 ATGGATCCCAATGGTTCTATTGATGATAAGGGTGAAAGTAGACTCTATATTGGTAACCTTGATCTTAGAATTACAGAAGCTGCTCTGCTTAAAATGTTTTCTCCTTATGGAAAGATCATTTCTGAGGACTTCTTATGGCACACGCACGGCCCAAAACGGGGGGAGCCACGCGGTTTTGCCTTCATCCAGTACAGCACAAAAGAGCAATTTCTGATTTCCATTGTTAAAGTGAGAATGCAGGAAGCAGAATTAGCCAAGGAGAAAATGCATGGGAGGTTAGCTTGCGGCCGGCTGCTGGTGGTTCGTCTTGCCGGTGAGAAGTGCATGTTGGAAACGACTGATAATTCTGCAAAAGCAGTGGGTGAAGGGCACAAAATGCATCTCACTGGTGGTGGTGGTGGCGGCATGGGACAAACAAGTCGTAGTGCCAAAATAGCTGCTATAAAGAATAAATTGAAATCCTTAGAGGAGGAGAGTTCTAGGACCAAGAAGCAGAAGCAAAAATGGTGA 510 0.451 MDPNGSIDDKGESRLYIGNLDLRITEAALLKMFSPYGKIISEDFLWHTHGPKRGEPRGFAFIQYSTKEQFLISIVKVRMQEAELAKEKMHGRLACGRLLVVRLAGEKCMLETTDNSAKAVGEGHKMHLTGGGGGGMGQTSRSAKIAAIKNKLKSLEEESSRTKKQKQKW 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13366g00002 169 Gene3D - 10 116 IPR012677 -
Mupr13366g00002 169 Coils Coil 145 169 - -
Mupr13366g00002 169 SMART rrm1_1 14 102 IPR000504 GO:0003723
Mupr13366g00002 169 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 13 106 IPR000504 GO:0003723
Mupr13366g00002 169 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 15 69 IPR000504 GO:0003723
Mupr13366g00002 169 SUPERFAMILY RNA-binding domain, RBD 7 108 IPR035979 GO:0003676
Mupr13366g00002 169 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 9 69 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13366g00002 13 107 Eukaryotic Initiation Factors Gene Family AT3G16380 31.579 1.56e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13366g00002 K24527 - gmx:100806572 238.81