Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13361g00006 ATGGCTAGGTCTGCCAAAGGGCATCAAGATGAATTCGAGGACGACGAAGAAGATGAAGAACTCTTAACTGGAAACACCTCTTCCGCTCTCAACAAAGTGAAGGTGGATGAACCCAGCAGGGGGAAGAGGGTGAACCCACATCGTTCAAAGCATTCAGAGACTGAGCAACTTCTGAGAGATCTCATACCTCAAAATGATCAAAAAAGAGATAAGGCATCCTTCTTGTTGGAGGTTATTGAATATATTCAGTTCCTTCAGGAAAAATTACAAATTTATGAACAGTCTTATGAAGGTTGGAATCAGGAGCCGACGAAATTAATTCCATGGAGAAATCATCATGGAGCTGCAGAAAATTCTACAGATCCTTCTCAAGCTATGCAAAATGGATCTGTTGATGAGAAAAATAACAATGTCTCTCCATTGTTGCCCAAAAATGTACAGAACTCAATAGAGTCTGATTTCTCAATGACAACTATTCAGAAGGGCCACACTCCTGGTTCAGCTGCAGAAGCAGTTCCTCTGACCATGCAAATGCGATTGGATATGTTTGATCCAGTTGTTAGCAGTGGTATAGCAACCCAACATCTGCAGGAACCTGTATCTAATGTTGACATTCCTTCCCATACCCAGCCTCAAGTGTGGCCTAATAAACCAAACAAGGGCAACTATATTCTTCCACATAATGATACAATGAAGGAACAAGAGGAGCTGGTGATTGAAAGTGGATCAGATAGCATCTCAAGTGCCTATTCTCAGGGAATATTAGATACTCTCACACAAGCATTGCAGTCTTCGGGCGTAGATATGTCTCAGACTAGTGTCTCAGTGCAAATTGATGTTGGTAGACGAGCAAATACTGGGTTGATCCCCTCTGCATATAGTTCAAAGGGTCATGAAAACCAATTTGTGAGCAACCCAGCAATAGCACATTCAGGAGTTGATTACTGCAATATTGATTCTGAGCAAAGTTCGAAGAGGCTCAGACAAGAAGCAAGCTAG 999 0.4204 MARSAKGHQDEFEDDEEDEELLTGNTSSALNKVKVDEPSRGKRVNPHRSKHSETEQLLRDLIPQNDQKRDKASFLLEVIEYIQFLQEKLQIYEQSYEGWNQEPTKLIPWRNHHGAAENSTDPSQAMQNGSVDEKNNNVSPLLPKNVQNSIESDFSMTTIQKGHTPGSAAEAVPLTMQMRLDMFDPVVSSGIATQHLQEPVSNVDIPSHTQPQVWPNKPNKGNYILPHNDTMKEQEELVIESGSDSISSAYSQGILDTLTQALQSSGVDMSQTSVSVQIDVGRRANTGLIPSAYSSKGHENQFVSNPAIAHSGVDYCNIDSEQSSKRLRQEAS 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13361g00006 332 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 1 329 IPR044295 GO:0003700|GO:0006351|GO:0046983
Mupr13361g00006 332 CDD bHLH_AtBIM_like 48 110 - -
Mupr13361g00006 332 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 50 106 IPR036638 GO:0046983
Mupr13361g00006 332 Pfam Helix-loop-helix DNA-binding domain 57 86 IPR011598 GO:0046983
Mupr13361g00006 332 MobiDBLite consensus disorder prediction 35 55 - -
Mupr13361g00006 332 Coils Coil 82 102 - -
Mupr13361g00006 332 MobiDBLite consensus disorder prediction 116 138 - -
Mupr13361g00006 332 MobiDBLite consensus disorder prediction 1 55 - -
Mupr13361g00006 332 MobiDBLite consensus disorder prediction 112 138 - -
Mupr13361g00006 332 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 35 85 IPR011598 GO:0046983
Mupr13361g00006 332 Gene3D - 45 106 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13361g00006 Mupr-Chr13361 40174 44412 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13361g00006 3 296 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 38.511 4.38e-49 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr13361g00006 HLH 5.8e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13361g00006 - - gmx:100791730 570.852