Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13361g00002 ATGAAAAACGAAGACGTAGTCGCTGGGTTTGAAAGAGCCAGGAAATTAATCCGCAGAGGTGGAATGGTTCATCAAGCTGATTTAGTTATCATTTGTGTCTCTGTTGGGGTAGCCCTTGGAGTTTTGATAGCTTGCCTCACATATTTTGGCATAAGGTGGTACAAGAAGCGAGCTCATCTTAGCCGATCTGTGAACGAGCCTAGTTTAACAACTCTTCCAATTCGAACAAATGGATTAGGAACGAGCACTGACTTTAGTGCTTCTCTCAACAGTTCCATAGCCACTTCAAGATCACCAAATCCTCAAAAAACCTCTCATTCAACTTGGTGGAATCATCAGAATAAAGATGTGTTCACTTCAGCATCAGGAATTCTGAAATACTCATTCAAAGAAATTCAAAAGGCCACACAAAATTTCACAAATACATTGGGACAAGGATCATTTGGCACAGTTTATAAAGCCATGATGCCTACAGGAGAGGTGGTAGCTGTGAAGATGCTTGCACCCAATTCCAAACAAGGGGAGAAAGAATTTCAAACAGAGGTGCTTCTGCTAGGAAGACTGCATCATCGGAATCTTGTAAATTTGTTAGGATACTGCATAGATAAAGGACAGCTTATGCTGGTTTACGAGTTCATGAGTAATGGAAGTTTAGAAAACCTTTTATATGGTGAAGAAAAGGAAATGAGTTGGAATGAAAGGCTGCAAATTGCTATTGATATTTCACACGGACTAGAATACCTTCATGAGGGGGCAGTGCCACCTGTCATACATCGCGATTTGAAATCTGCTAATATATTGCTAGATCACTCAATGAGAGCTAAGGTTGCTGATTTTGGGCTCTCAAAGGAAGAGATCTTTGATGGCCGTAATTCTGGGCTTAAAGGTACATATGGCTACATGGACCCAGCATACATTTCCACGAGCAAGTTCACAACAAAGAGTGACATTTACAGTTTTGGTATAATAATTTTTGAGCTCATCACTGCCATCCACCCACATCAAAATTTGATGGAATATGTCAACCTTGCTGCAATGGATTATGATGGTGTAGATGGGATTCTTGACAAGCAACTAGTGGGAAAATGCAATCTTGAAGAAGTAAGACAGCTTGCAAAAATTGCACATAAATGTTTGCACCAATCACCTAGGAAACGCCCTTCCATAGGTGAGGTTTCACAGGGTATGTTGAGGATCAAGCAAAGGCGCCTCGTGAAAGAAGACACCATGTCATTTGCAAGCAGCAATTTCTCCCGAACTGTGAGTCAAATAGAGAATCAACAGGTTGAATTAAGTAGAATAACCACCATGAACCACAGGGAAATGAGGTGA 1332 0.4092 MKNEDVVAGFERARKLIRRGGMVHQADLVIICVSVGVALGVLIACLTYFGIRWYKKRAHLSRSVNEPSLTTLPIRTNGLGTSTDFSASLNSSIATSRSPNPQKTSHSTWWNHQNKDVFTSASGILKYSFKEIQKATQNFTNTLGQGSFGTVYKAMMPTGEVVAVKMLAPNSKQGEKEFQTEVLLLGRLHHRNLVNLLGYCIDKGQLMLVYEFMSNGSLENLLYGEEKEMSWNERLQIAIDISHGLEYLHEGAVPPVIHRDLKSANILLDHSMRAKVADFGLSKEEIFDGRNSGLKGTYGYMDPAYISTSKFTTKSDIYSFGIIIFELITAIHPHQNLMEYVNLAAMDYDGVDGILDKQLVGKCNLEEVRQLAKIAHKCLHQSPRKRPSIGEVSQGMLRIKQRRLVKEDTMSFASSNFSRTVSQIENQQVELSRITTMNHREMR 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13361g00002 443 ProSitePatterns Protein kinases ATP-binding region signature. 143 165 IPR017441 GO:0005524
Mupr13361g00002 443 FunFam Leucine-rich repeat receptor-like protein kinase 113 212 - -
Mupr13361g00002 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Mupr13361g00002 443 CDD STKc_IRAK 143 399 - -
Mupr13361g00002 443 ProSiteProfiles Protein kinase domain profile. 137 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr13361g00002 443 Gene3D Phosphorylase Kinase; domain 1 101 212 - -
Mupr13361g00002 443 FunFam Calcium/calmodulin-regulated receptor-like kinase 2 213 420 - -
Mupr13361g00002 443 Pfam Protein tyrosine and serine/threonine kinase 139 393 IPR001245 GO:0004672|GO:0006468
Mupr13361g00002 443 Gene3D Transferase(Phosphotransferase) domain 1 213 421 - -
Mupr13361g00002 443 SUPERFAMILY Protein kinase-like (PK-like) 105 393 IPR011009 -
Mupr13361g00002 443 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 28 408 - -
Mupr13361g00002 443 SMART serkin_6 137 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13361g00002 Mupr-Chr13361 11682 16926 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13361g00002 113 392 Receptor kinase-like Gene Family AT4G39110 44.068 5.44e-70 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Mupr13361g00002 PK_Tyr_Ser-Thr 1.4e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13361g00002 - - gmx:100794239 774.237