Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1335g00002 ATGGTGTCACTGCAAGTAGCGCTTGTGGTTTTCACTTTCATATTTCATGCAGCAACAGTGACATCTACACTCCACCTCAGCAGTAACTTAAATGTATCGTCTTCCACAAACTCCTCCGAGAATAGCCACCATTGGATCGGACCCATCGGCCACCGCGTAATCACCGTCGACATTAACGGCGGCGGCCACTTCCGGTCCGTCCAAGACGCCGTCAACGCCGTCCCAGACAATAACAGAAAGAACGTCCTTATTCAAATCAGCCCCGGATGCTACATAGAAAAGGTGGTGGTGCCCGTGACTAAGCCGTACATAACGTTTGAAGGCGCGGGTAAAGAAGTGACGGTGATAGAATGGCATGATCGAGCCAGTGACCCTGGTCCCAGCGGACAGCAATTGCGTACTTACAGAACCGCTTCTGTTACTGTTTTTGCCAGCTATTTTTCTGCTAGGAATATCAGCTTCAAGAACACAGCGCCTGCACCAATGCCGGGGATGCAGGGATGGCAAGCGGCGGCGTTTCGCATATCCGGCGACAAAGCATACTTCTCCGGCTGCGGCTTCTACGGCGCACAAGACACACTTTGCGACGATGCAGGCAGACATTACTTCAAGGAATGCTACATAGAGGGATCCATTGATTTCATTTTTGGGAATGGCAGGTCCATGTACAAGGATTGCTGGATACACTCAATAGCGACTCGGTTCGGTTCCATAGCAGCCCACGATAGGAAGAACCCAAACGAGAAGACAGGATTCGCGTTCGTACGATGCAGGGTGACAGGTACGGGTCCACTATATGTGGGGCGAGCAATGGGACAGTATTCCAGAATTGTCTACTCCTACACATATTTCGATGATATTGTTGCACATGGCGGTTGGGATGATTGGGACCATGCAGACAATAAGAACAAGACTGTGTTCTTCGGAGTGTACAAGTGTTGGGGACCAGGAGCAGAGGCTGTACGTGGGGTCTCATGGGCCCGAGAGTTAGATTTCCAATCGGCCCATCCATTTATTAGGAAGAGCTTCGTCAATGGGCGACACTGGATCGCGCCATCTGATGCTTAG 1068 0.5094 MVSLQVALVVFTFIFHAATVTSTLHLSSNLNVSSSTNSSENSHHWIGPIGHRVITVDINGGGHFRSVQDAVNAVPDNNRKNVLIQISPGCYIEKVVVPVTKPYITFEGAGKEVTVIEWHDRASDPGPSGQQLRTYRTASVTVFASYFSARNISFKNTAPAPMPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCWIHSIATRFGSIAAHDRKNPNEKTGFAFVRCRVTGTGPLYVGRAMGQYSRIVYSYTYFDDIVAHGGWDDWDHADNKNKTVFFGVYKCWGPGAEAVRGVSWARELDFQSAHPFIRKSFVNGRHWIAPSDA 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1335g00002 355 Pfam Pectinesterase 54 346 IPR000070 GO:0030599|GO:0042545
Mupr1335g00002 355 Gene3D - 50 354 IPR012334 -
Mupr1335g00002 355 ProSitePatterns Pectinesterase signature 2. 208 217 IPR033131 -
Mupr1335g00002 355 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 49 351 - -
Mupr1335g00002 355 FunFam Pectinesterase 49 352 - -
Mupr1335g00002 355 SUPERFAMILY Pectin lyase-like 51 352 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1335g00002 Mupr-Chr1335 27952 31202 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1335g00002 4 355 Carbohydrate Esterase AT5G47500 73.596 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1335g00002 - - gmx:100816190 663.685