Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13351g00001 ATGAGACAAATTCTTCCAAATAATGCAAAAATTTCAGACAGTGTGAAGGAGATGATTCAACAAAGTGCTACAAAGTACATAATCATTGTAACTAGGAAAGCCAAGGAGCGATGCCAAAGCGAGTATAGAAAAATTATGAATGCAGAAGACCTGTTATGGGCCATAGAGAATCTGGGCTTTGATGACTATGTTGGGCCACTCACTACATTCCTCTATCGATATCGAAACATTGAAGGAAGAGACCTCCTCATTTGTAGCCAAGAGCCCATTCCTCACATTGACAACAATGGGTCTGGGCCTGAGACTAATCTTGTTCCTAATCCTGCATCCACCTTGGAGAGGCTTCACTCTCCCTTATCACCAATTTCTTCTTCTGGGCCGGACTTTTCCATGGATCCATGCATAAATATGGAAATGTTTGACCCAAATGATATGGATGAGTTCTTCCAAAATGAATTTGGTGTTGGTTGCTCAAATGGATGGTCCGGTGCAATTCCTGTACAAGTTTTTATGAAACTTGAACCTGACTAA 531 0.4105 MRQILPNNAKISDSVKEMIQQSATKYIIIVTRKAKERCQSEYRKIMNAEDLLWAIENLGFDDYVGPLTTFLYRYRNIEGRDLLICSQEPIPHIDNNGSGPETNLVPNPASTLERLHSPLSPISSSGPDFSMDPCINMEMFDPNDMDEFFQNEFGVGCSNGWSGAIPVQVFMKLEPD 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13351g00001 176 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 1 55 IPR003958 -
Mupr13351g00001 176 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 86 IPR027113 GO:0001228|GO:0006355|GO:0016602
Mupr13351g00001 176 Gene3D Histone, subunit A 1 83 IPR009072 GO:0046982
Mupr13351g00001 176 PRINTS CCAAT-binding transcription factor subunit A signature 19 37 - -
Mupr13351g00001 176 PRINTS CCAAT-binding transcription factor subunit A signature 57 75 - -
Mupr13351g00001 176 PRINTS CCAAT-binding transcription factor subunit A signature 38 56 - -
Mupr13351g00001 176 SUPERFAMILY Histone-fold 1 81 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13351g00001 Mupr-Chr13351 3734 4791 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13351g00001 1 86 CCAAT-HAP3 Transcription Factor Family AT5G47670 55.814 9.62e-30 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mupr13351g00001 CBFD_NFYB_HMF 9.9e-12 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13351g00001 K08065 - pda:103724115 108.227