Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1334g00001 ATGGTGAGAACCCCTTACTGTGACAAAAGTGGACTGAAGAAAGGAACATGGACGCCAGAAGAAGACATGAAGTTGATTGCTCATGTTACTACATATGGCCACAAGAATTGGCGCAAAATGCCCAAGTTTGCAGGTCTTGCGAGGTGTGGAAAGAGCTGCAGATTGAGGTGGATGAATTATTTAAGGCCAGGCATCAAAAGAGGGAACTACACTGATGAAGAAGAAGAGATAATTATCAAACTGCACGCAAGGCTTGGAAATAAGTGGTCTGCGATTGCCTCTCACTTACCTGGAAGATCAGACAACGAGATAAAAAATCACTGGCATGCCCATATTAAGAAGCGCTTTCAACAGGATTCAGTAACAATTGAAAGAGTTGAAGCTTCCACGCCAAAGCATCAGTCCCCAGTTGAATCCATTAAAGAGAAGGACTCTGTGGAAGTTGTTGCAAGCCCTTTAAACAGTACTTCTCTAGCTACTTCTTCCACCACTCCTGATGCTTCTCCATCGTCCCAGTCCCACCAAACATCATTCAGCGATTTTTTCTGCATGATGACGGAGCAAGCTGCACCAGCCAGTGACGGGACTTTGGTTATTGATTACTTTGCTGATTTTATGGAGGAAAACATAGATCCTATAAGTGCATACTCTTGGAAAGAACTCTATGAAATTTCGTACTTCTCACCCCAATTTCTCGCACTCGCACCTTTTGAGACTGAACCAGGAAGCTTTTGTCCAGTTGATGATGTTTGGGGGCTGTTAGAATAA 768 0.4362 MVRTPYCDKSGLKKGTWTPEEDMKLIAHVTTYGHKNWRKMPKFAGLARCGKSCRLRWMNYLRPGIKRGNYTDEEEEIIIKLHARLGNKWSAIASHLPGRSDNEIKNHWHAHIKKRFQQDSVTIERVEASTPKHQSPVESIKEKDSVEVVASPLNSTSLATSSTTPDASPSSQSHQTSFSDFFCMMTEQAAPASDGTLVIDYFADFMEENIDPISAYSWKELYEISYFSPQFLALAPFETEPGSFCPVDDVWGLLE 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1334g00001 255 MobiDBLite consensus disorder prediction 154 173 - -
Mupr1334g00001 255 CDD SANT 69 112 IPR001005 -
Mupr1334g00001 255 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mupr1334g00001 255 CDD SANT 16 61 IPR001005 -
Mupr1334g00001 255 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mupr1334g00001 255 Gene3D - 13 66 - -
Mupr1334g00001 255 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mupr1334g00001 255 SMART sant 13 63 IPR001005 -
Mupr1334g00001 255 SMART sant 66 114 IPR001005 -
Mupr1334g00001 255 Gene3D - 68 144 - -
Mupr1334g00001 255 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 179 - -
Mupr1334g00001 255 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mupr1334g00001 255 MobiDBLite consensus disorder prediction 127 146 - -
Mupr1334g00001 255 FunFam MYB-related transcription factor 13 66 - -
Mupr1334g00001 255 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mupr1334g00001 255 Pfam Myb-like DNA-binding domain 67 109 IPR001005 -
Mupr1334g00001 255 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1334g00001 Mupr-Chr1334 5106 6738 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1334g00001 1 187 MYB Transcription Factor Family AT2G31180 47.059 1.70e-59 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr1334g00001 Myb_DNA-binding 7.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1334g00001 K09422 - gmx:106799185 347.436