Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13348g00001 ATGGCCGAGGAAGCCAAAGCCAGAGGCAACGCTGCATTCTCCGGCGGTGACTTCGGCGGCGCCATCCGGCACTTCTCCGACGCCATCGCCCTAGCCCCCTCGAACCACGTCCTCTACTCGAACCGATCCGCCGCGTACGCCTCACTCCAGAACTACACCGAAGCCTTAGCTGACGCCCAGAAAACCGTCGACCTCAAGCCAGACTGGCCCAAGGGCTACAGCCGCCTCGGCGCCGCCCACCTCGGCCTCGCCCGCCACCGCGACGCCGTTTCCGCCTACAAAGCCGGCCTCCAAATCGACCCCGACAACGCCGCCCTCAAAGCCGGTTTAGCCGACGCCCAAGCCGCGGCTTCCCGCTCCCCGCCCACTAGCCCCTTCGCCAGCGCCTTCTCGGGGCCCGACATGTGGGCCCGCCTTACTGCGGACCCCACGGCCCGGGCCTATCTTCAGCAGCCCGATTTCGTCAAGATCATGCAGGACATTCATAAGGACCCCAACAAGTTCAACTTGCACTTGAGCGACCAAAGAGTCATGCATGCAATCGGGGTTTTGCTCAATGTTAAGATTCAAACCCCTAACGACGACGACAATGCTGATGTGTCCGAGGAGGAGCAGGACGAGCCTGTGTCTGAGCTTGCACCTGAACCCGAACCCAAACCCAAACCCAAACCCAAACCCAAACCCGAGCCTGAAGCGGTGGAATTGAATGAGGAGGAGAAGGGAGCTAGGGATAGGAAGGGCCAGGCTCAGAAGGAAAAGGAAGCTGGCAATGCAGCTTACAAGAAGAAGGATTTCGAAACGGCGATTCAACATTACACCAAAGCTTTGGAGTTGGACGATGACGACATATCGTACCTTACTAATCGTGCCGCTGTTTACTTGGAGATGGGAAAGTTTGAGGAATGCATAAAAGATTGTGAAAAGGCTGTTGAAAGGGGAAGAGAACTAAGATCAGACTTCAAGATGATAGCTAGAGCTTTGACAAGGAAAGGTACTGCATTGGTCAAAATGGCAAAATGCTCTAAGGATTTTGCACCTGCCATTGAGACTTTCCAAAAAGCACTTACAGAGCACCGCAATCCAGACACCTTGAAGAAACTGAACGAAGCTGAAAAGGCTAAGAAAGAACTAGAGCAACAAGAATATTTTGATCCAAAATTGGCTGACGAGGAGAGAGAAAAAGGAAATGAATTATTCAAGCAGCAGAAGTATCCTGAGGCTATGAAGCATTATACAGAAGCTATAAAAAGGAACCCAAATGATTCTAGGGCTTACAGTAACAGAGCTGCATGCTATACAAAACTGGGGGCATTGCCTGAAGGTTTGAAAGATGCGGAGAAATGCATTGAGCTTGATCCAACGTTTTCAAAGGGTTATACTAGGAAAGGTGCAGTGCAATTTTTCATGAAAGAATATGATAAAGCTTTGGAAACATACATGGAGGGGTTGAAACATGACCCTAACAATCAGGAGTTGCTTGATGGTCGTAGAAGGTGTACAGAACAAATAAATAAGGCTAGCCGTGGAGATTTTACTCCTGATGAGTTAAAGGAGAGACAGGCCAAGGCAATGCAAGACCCAGAGATACAGAGCATCCTTCAAGACCCTGTTATGAGACAAGTATTGGCTGATTTCCAGGAAAATCCCATATCTGCCCAGGAACATACAAAGAATCCAATGGTGATGAACAAGATTCAAAAGCTGATCAGTGCTGGGATTGTCCAGATGAGATGA 1734 0.5029 MAEEAKARGNAAFSGGDFGGAIRHFSDAIALAPSNHVLYSNRSAAYASLQNYTEALADAQKTVDLKPDWPKGYSRLGAAHLGLARHRDAVSAYKAGLQIDPDNAALKAGLADAQAAASRSPPTSPFASAFSGPDMWARLTADPTARAYLQQPDFVKIMQDIHKDPNKFNLHLSDQRVMHAIGVLLNVKIQTPNDDDNADVSEEEQDEPVSELAPEPEPKPKPKPKPKPEPEAVELNEEEKGARDRKGQAQKEKEAGNAAYKKKDFETAIQHYTKALELDDDDISYLTNRAAVYLEMGKFEECIKDCEKAVERGRELRSDFKMIARALTRKGTALVKMAKCSKDFAPAIETFQKALTEHRNPDTLKKLNEAEKAKKELEQQEYFDPKLADEEREKGNELFKQQKYPEAMKHYTEAIKRNPNDSRAYSNRAACYTKLGALPEGLKDAEKCIELDPTFSKGYTRKGAVQFFMKEYDKALETYMEGLKHDPNNQELLDGRRRCTEQINKASRGDFTPDELKERQAKAMQDPEIQSILQDPVMRQVLADFQENPISAQEHTKNPMVMNKIQKLISAGIVQMR 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13348g00001 577 SUPERFAMILY TPR-like 1 114 IPR011990 GO:0005515
Mupr13348g00001 577 Pfam Tetratricopeptide repeat 457 489 IPR001440 GO:0005515
Mupr13348g00001 577 FunFam Stress-induced phosphoprotein 1 246 380 - -
Mupr13348g00001 577 FunFam Putative stress-induced-phosphoprotein 1 122 190 - -
Mupr13348g00001 577 MobiDBLite consensus disorder prediction 191 258 - -
Mupr13348g00001 577 ProSiteProfiles TPR repeat profile. 2 35 IPR019734 GO:0005515
Mupr13348g00001 577 ProSiteProfiles TPR repeat profile. 422 455 IPR019734 GO:0005515
Mupr13348g00001 577 Pfam TPR repeat 395 436 - -
Mupr13348g00001 577 Pfam TPR repeat 256 297 - -
Mupr13348g00001 577 ProSiteProfiles TPR repeat profile. 249 282 IPR019734 GO:0005515
Mupr13348g00001 577 Pfam Tetratricopeptide repeat 7 68 - -
Mupr13348g00001 577 Gene3D - 122 190 - -
Mupr13348g00001 577 MobiDBLite consensus disorder prediction 212 258 - -
Mupr13348g00001 577 SUPERFAMILY TPR-like 248 376 IPR011990 GO:0005515
Mupr13348g00001 577 Coils Coil 232 252 - -
Mupr13348g00001 577 Pfam STI1 domain 518 569 IPR041243 -
Mupr13348g00001 577 Pfam STI1 domain 133 186 IPR041243 -
Mupr13348g00001 577 FunFam hsp70-Hsp90 organizing protein 3-like 387 501 - -
Mupr13348g00001 577 ProSiteProfiles TPR repeat profile. 388 421 IPR019734 GO:0005515
Mupr13348g00001 577 ProSiteProfiles TPR repeat profile. 70 103 IPR019734 GO:0005515
Mupr13348g00001 577 Gene3D Tetratricopeptide repeat domain 246 382 IPR011990 GO:0005515
Mupr13348g00001 577 Coils Coil 360 380 - -
Mupr13348g00001 577 FunFam Stress-induced phosphoprotein 1 1 116 - -
Mupr13348g00001 577 PANTHER TPR REPEAT CONTAINING PROTEIN 2 549 - -
Mupr13348g00001 577 MobiDBLite consensus disorder prediction 196 211 - -
Mupr13348g00001 577 Gene3D Tetratricopeptide repeat domain 1 116 IPR011990 GO:0005515
Mupr13348g00001 577 SMART CBM 526 565 IPR006636 -
Mupr13348g00001 577 SMART CBM 132 171 IPR006636 -
Mupr13348g00001 577 SUPERFAMILY TPR-like 387 500 IPR011990 GO:0005515
Mupr13348g00001 577 ProSiteProfiles TPR repeat profile. 456 489 IPR019734 GO:0005515
Mupr13348g00001 577 ProSiteProfiles TPR repeat profile. 36 69 IPR019734 GO:0005515
Mupr13348g00001 577 SMART tpr_5 36 69 IPR019734 GO:0005515
Mupr13348g00001 577 SMART tpr_5 324 361 IPR019734 GO:0005515
Mupr13348g00001 577 SMART tpr_5 422 455 IPR019734 GO:0005515
Mupr13348g00001 577 SMART tpr_5 388 421 IPR019734 GO:0005515
Mupr13348g00001 577 SMART tpr_5 283 316 IPR019734 GO:0005515
Mupr13348g00001 577 SMART tpr_5 456 489 IPR019734 GO:0005515
Mupr13348g00001 577 SMART tpr_5 249 282 IPR019734 GO:0005515
Mupr13348g00001 577 SMART tpr_5 70 103 IPR019734 GO:0005515
Mupr13348g00001 577 SMART tpr_5 2 35 IPR019734 GO:0005515
Mupr13348g00001 577 Gene3D Tetratricopeptide repeat domain 387 507 IPR011990 GO:0005515
Mupr13348g00001 577 Gene3D - 508 577 - -
Mupr13348g00001 577 FunFam Stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing) 509 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13348g00001 Mupr-Chr13348 8186 11922 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13348g00001 1 81 U-box Gene Family AT3G07370 33.333 2.76e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13348g00001 K09553 - gmx:100780296 934.095