Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13330g00003 ATGGAGATTCTGAGGCTTCTTCGCTCTGATTCAGGAGCTGGGTTGGAGCATGGAAGCACAAAGTCTCAAAGTAAGACAAAACAGAACTCAAATTCTTCTGAACCAAAAGCTCGTTTAAAAACTTCAGCATCAAATGTTGACAAACCCATCTCCAATAACCTTAAGTGCTTCACATTCAATGATCTAAAAGAGGCCACTAAGAACTTCAGGCAAGAAAACTTAATTGGAGAAGGAGGGTTTGGGTTTGTCTACAAGGGGTGGATAGATGAGAACACCTGTGCTCCCACAAGACCAGGGACTGGAATTGTAGTGGCCATCAAGAAACTTAAGCCAGAAAGCTTTCAAGGCCACAGGGAATGGCTGACAGAAGTCAATTATTTAGGCCTGCTTCCCCATGAAAATCTGGTGAAACTTATTGGCTACTGCTTAGATGGTAAAAACAGGCTTCTAGTTTATGAGTTTATGCAGAAAGGAAGTTTGGAAAATCATTTATTCAGAAAAGGTGTTCAACCTATTCCCTGGATTACACGGATCAATATTGCAGTTGCTGTTGCAAGAGGATTAACATTTTTACACACCCTTGATGCAAATGTTATATATCGGGATTTAAAGGCTTCCAACATTCTACTTGATTCGGATTTCAATGCAAAGCTTTCGGATTTTGGCTTGGCAAGAGATGGTCCAACTGGAGATAACACTCACGTTTCAACCAGAGTTATTGGAACTCATGGTTATGCTGCACCAGAGTATGTAGCTACAGGTCATTTGACCCCAAGGAGTGATGTATACAGCTTTGGAGTTGTGTTGTTGGAGTTACTAACAGGAAGGCGTGTAGTTGAAGAAGAGAGACCTGGATTTTCAGAAGAAACACTGGTGGATTGGGCAAGACCATTCCTGAGTGATAGCAGAAGGATTTTGAGAATCATGGATACAAGGTTGGGTGGTCAATACTCCAAAAAAGGAGCACAAGCTGCAGCAGCACTTGCACTACAATGTCTAAATACTGATCCCAAATATAGACCAACCATGGTAAATGTTCTAGCAGCATTGGAAGCACTACATTCCTCAAATTCACTCCCAAGGACCCCAAAATCTGGAACTGAGAATCATACAACAAAGCATTCTAGTTCTAGTCATTCCCACAAGTCAGCTACAAACATTAACAAACTTTGA 1173 0.4135 MEILRLLRSDSGAGLEHGSTKSQSKTKQNSNSSEPKARLKTSASNVDKPISNNLKCFTFNDLKEATKNFRQENLIGEGGFGFVYKGWIDENTCAPTRPGTGIVVAIKKLKPESFQGHREWLTEVNYLGLLPHENLVKLIGYCLDGKNRLLVYEFMQKGSLENHLFRKGVQPIPWITRINIAVAVARGLTFLHTLDANVIYRDLKASNILLDSDFNAKLSDFGLARDGPTGDNTHVSTRVIGTHGYAAPEYVATGHLTPRSDVYSFGVVLLELLTGRRVVEEERPGFSEETLVDWARPFLSDSRRILRIMDTRLGGQYSKKGAQAAAALALQCLNTDPKYRPTMVNVLAALEALHSSNSLPRTPKSGTENHTTKHSSSSHSHKSATNINKL 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13330g00003 390 SUPERFAMILY Protein kinase-like (PK-like) 47 351 IPR011009 -
Mupr13330g00003 390 MobiDBLite consensus disorder prediction 15 46 - -
Mupr13330g00003 390 Gene3D Transferase(Phosphotransferase) domain 1 155 377 - -
Mupr13330g00003 390 ProSitePatterns Protein kinases ATP-binding region signature. 75 108 IPR017441 GO:0005524
Mupr13330g00003 390 MobiDBLite consensus disorder prediction 1 46 - -
Mupr13330g00003 390 FunFam Serine/threonine-protein kinase BIK1 36 154 - -
Mupr13330g00003 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Mupr13330g00003 390 PANTHER OS01G0588500 PROTEIN-RELATED 27 354 - -
Mupr13330g00003 390 CDD STKc_IRAK 75 353 - -
Mupr13330g00003 390 Gene3D Phosphorylase Kinase; domain 1 43 154 - -
Mupr13330g00003 390 FunFam PTI1-like tyrosine-protein kinase 3 155 362 - -
Mupr13330g00003 390 SMART serkin_6 69 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr13330g00003 390 MobiDBLite consensus disorder prediction 357 390 - -
Mupr13330g00003 390 Pfam Protein kinase domain 70 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr13330g00003 390 ProSiteProfiles Protein kinase domain profile. 69 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13330g00003 Mupr-Chr13330 4309 7334 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13330g00003 47 350 Glycoside Hydrolase AT3G07070 53.074 1.19e-105 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mupr13330g00003 Pkinase 2.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13330g00003 - - gmx:102664409 652.129