Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1332g00006 ATGGCGAGGATAAAGGTGTACGAGCTGAGGAACAAGACGAAGGCGGAGCTGCTGAACCAGCTGAAGGATCTCAAGGCGGAGCTCGCCCTGCTCCGAGTGGCCAAGGTCACCGGCGGCGCCCCCAACAAGCTCTCCAAAATCAAGGTGGTGAGGCTTTCGATAGCGCAGGTGTTGACGGTGATTTCCCAAAAGCAGAAAGCGGCGCTCAGAGAGGCTTACAAGAATAAGAAGTATTTGCCCCTTGACCTCCGTCCCAAGAAGACTCGCGCCATTCGCAGACGCCTTACCAAACACCAGTTGTGTTGGTGTCGAGCAGGTGCAGCTCAACATATTCTTAGGGCTAAAGCATCATTGAAGACAGAACGGGAGAAGAAGAAGGAGCTGTACTTTCCACTAAGAAAGTATGCAATCAAAGTTTCGATGCCTGCCAGTGGCAGCATTCCAATTTTTAGTACCAGAGTTGTTTCGATGCCTGCCTTTAGAGTTTCCAAGATGGAGTGTGCAAAAGACATGTGTGCCATTTCACAAGCACTTTCAACTATTATATGGAGGCCCAAAAACCTACTAACTGGCATGGTTTTGTAG 585 0.4974 MARIKVYELRNKTKAELLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKYLPLDLRPKKTRAIRRRLTKHQLCWCRAGAAQHILRAKASLKTEREKKKELYFPLRKYAIKVSMPASGSIPIFSTRVVSMPAFRVSKMECAKDMCAISQALSTIIWRPKNLLTGMVL 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1332g00006 194 SUPERFAMILY Ribosomal protein L29 (L29p) 4 65 IPR036049 GO:0003735|GO:0005840|GO:0006412
Mupr1332g00006 194 Gene3D - 1 77 IPR036049 GO:0003735|GO:0005840|GO:0006412
Mupr1332g00006 194 Pfam Ribosomal L29 protein 8 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Mupr1332g00006 194 NCBIfam 50S ribosomal protein L29 8 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Mupr1332g00006 194 Hamap 50S ribosomal protein L29 [rpmC]. 4 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Mupr1332g00006 194 FunFam 60S ribosomal protein L35 1 77 - -
Mupr1332g00006 194 PANTHER 60S RIBOSOMAL PROTEIN L35 1 139 IPR045059 GO:0000463|GO:0022625
Mupr1332g00006 194 Coils Coil 7 34 - -
Mupr1332g00006 194 CDD Ribosomal_L29_HIP 8 64 - -
Mupr1332g00006 194 Gene3D - 78 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1332g00006 Mupr-Chr1332 88518 90367 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1332g00006 1 139 Cytoplasmic Ribosomal Protein Gene Family AT3G09500 79.137 6.01e-69 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1332g00006 K02918 - gmx:100778013 221.09