Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13323g00002 ATGGGTGGTGTTGCATGGACAGAAGAAGAAGACCACTTGCTCAAGAAATGCATACAACAATATGGAGAGGGAAAGTGGCATCGTGTTCCTTTACTGGCTGGTTTAAACAGGTGCCGAAAGAGTTGTAGGCTAAGATGGCTGAACTATCTCCGTCCTAACATCAAGAGAGGAAATTTTGCGGAGGAAGAAGTGGAGATGATAATCAAACTCCACAAATTATTAGGCAACAGGTGGTCATTGATTGCAGGAAGGCTACCAGGAAGGACAGCTAATGACGTGAAAAACTATTGGAATTGTCATCTGAGCAAAAAACTAAATGCTCTAGAAGGTGAAGATAGACAAGTAAGCAGAGAAGTTCAAGTGATAAGGCCCCAGGCTAGGAACATTGGTCCAAGCTCAGGGAAAAGAAGGGGTCAGAGTGAGTCTCCAACTGACAAAGGAGTTCAACAAGAGAGCAGCATGTCCTCACTGACATTTGATGCTGATGGACAGAATCACATGCTTGAAACTCAGCAAGACAACATATATGCATGCTTGGACCAACAGGGCATTGTTGGTGAGTTGTCAATGGACTTTCAATTAGAAGGATTTGAAGCAATGATGAATGGTGAGGGTAGTAGTAGTAGCAGCCAATGGGATTGGGGTGATTTGCTCTTAGACATGGATTTGTATAAGTGA 678 0.4336 MGGVAWTEEEDHLLKKCIQQYGEGKWHRVPLLAGLNRCRKSCRLRWLNYLRPNIKRGNFAEEEVEMIIKLHKLLGNRWSLIAGRLPGRTANDVKNYWNCHLSKKLNALEGEDRQVSREVQVIRPQARNIGPSSGKRRGQSESPTDKGVQQESSMSSLTFDADGQNHMLETQQDNIYACLDQQGIVGELSMDFQLEGFEAMMNGEGSSSSSQWDWGDLLLDMDLYK 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13323g00002 225 SMART sant 2 52 IPR001005 -
Mupr13323g00002 225 SMART sant 55 103 IPR001005 -
Mupr13323g00002 225 MobiDBLite consensus disorder prediction 117 155 - -
Mupr13323g00002 225 FunFam Myb transcription factor 3 55 - -
Mupr13323g00002 225 ProSiteProfiles Myb-like domain profile. 51 101 IPR001005 -
Mupr13323g00002 225 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 51 105 IPR017930 -
Mupr13323g00002 225 MobiDBLite consensus disorder prediction 132 155 - -
Mupr13323g00002 225 Pfam Myb-like DNA-binding domain 5 50 IPR001005 -
Mupr13323g00002 225 Pfam Myb-like DNA-binding domain 56 98 IPR001005 -
Mupr13323g00002 225 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 50 IPR017930 -
Mupr13323g00002 225 ProSiteProfiles Myb-like domain profile. 6 50 IPR001005 -
Mupr13323g00002 225 Gene3D - 57 123 - -
Mupr13323g00002 225 SUPERFAMILY Homeodomain-like 5 97 IPR009057 -
Mupr13323g00002 225 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 5 161 - -
Mupr13323g00002 225 CDD SANT 58 101 IPR001005 -
Mupr13323g00002 225 CDD SANT 5 50 IPR001005 -
Mupr13323g00002 225 Gene3D - 4 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13323g00002 Mupr-Chr13323 9728 11392 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13323g00002 5 178 MYB Transcription Factor Family AT1G66370 49.425 2.55e-56 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr13323g00002 Myb_DNA-binding 9.2e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13323g00002 K09422 - gmx:100798101 404.831