Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13316g00006 ATGCGAACCCTCTGCGACGTATGCGAGAGCGCCGCTGCCATTTTCTTCTGCGCCCCCGATGAGGCTGCTCTATGCTCTGCTTGTGACCACAAGATCCATATGTGTAACAAACTTGCTAGTAGACACGTTCGGGTTGGCCTTGCTGACCCCACTGATGTTCCACGCTGTGACATATGCGAAAATGCACCTGCTTTCTTTTACTGTGAGATAGATGGTAGTTCGCTGTGTCTGCAATGTGATATGGTTGTGCATGTTGGTGGTAAAAGAACCCATGAAAGATATCTTCTATTGAGGCAAAGAGTTGAGTTTCCAGGTGATAAACCTGCTCAAATGGAAGAACTAGGGCTGCAACCACTGGATCAAAATGAATTGAGGAGGGATGAAAGTCAGTCACTCAAGCTAAAAACAAGAGATTGTCAGCAGAATCACATTGTCTCACCTGTTCCAAGGCAAGAAAACAATATTGATGGTCATGGAAAAATGGATAAAAAATTATTTGATCTTAATACTAGGCCACTGCGGTTAAATGGACCAGCACCAAACAACCAGGAACAAGATATGGATATTTTAAGAGGCAATAATCATGAATCTGCGAATGGTGGTCATGGTCTAGGATTTGAACTGAGTCTCGAG 633 0.4392 MRTLCDVCESAAAIFFCAPDEAALCSACDHKIHMCNKLASRHVRVGLADPTDVPRCDICENAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHERYLLLRQRVEFPGDKPAQMEELGLQPLDQNELRRDESQSLKLKTRDCQQNHIVSPVPRQENNIDGHGKMDKKLFDLNTRPLRLNGPAPNNQEQDMDILRGNNHESANGGHGLGFELSLE 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13316g00006 211 Gene3D Classic Zinc Finger 2 96 - -
Mupr13316g00006 211 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Mupr13316g00006 211 FunFam B-box zinc finger protein 19 2 92 - -
Mupr13316g00006 211 SMART bboxneu5 1 47 IPR000315 GO:0008270
Mupr13316g00006 211 SMART bboxneu5 51 96 IPR000315 GO:0008270
Mupr13316g00006 211 CDD Bbox1_BBX-like 56 96 - -
Mupr13316g00006 211 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 169 - -
Mupr13316g00006 211 Pfam B-box zinc finger 3 42 IPR000315 GO:0008270
Mupr13316g00006 211 Pfam B-box zinc finger 53 92 IPR000315 GO:0008270
Mupr13316g00006 211 CDD Bbox1_BBX-like 4 47 - -
Mupr13316g00006 211 ProSiteProfiles Zinc finger B-box type profile. 51 96 IPR000315 GO:0008270
Mupr13316g00006 211 MobiDBLite consensus disorder prediction 172 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13316g00006 Mupr-Chr13316 34145 36771 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13316g00006 1 196 C2C2-CO-like Transcription Factor Family AT2G21320 59.694 4.66e-78 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Mupr13316g00006 zf-B_box 8.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13316g00006 - - gmx:100527369 384.8